PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724664.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 850aa    MW: 93400.9 Da    PI: 6.4092
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.52.3e-181977357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022724664.1 19 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                    6789*****************************************************97 PP
2START176.41.8e-551693762204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++  ++l vi +g  g+++l+
  XP_022724664.1 169 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRPSWFRDCRCLDVLGVIPTGngGTIELI 262
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s++  p+   +s++vRae+lpSg+li+p+++g+s +++v+hvdl+ ++++++lr+l+
  XP_022724664.1 263 YMQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSTTGGPTgppTSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLY 357
                     *****************************************9999999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_022724664.1 358 ESSKILAQKMTIAALRQIR 376
                     ***************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MALSMHKESL NNKQMDSSKY VRYTPEQVEA LERVYTECPK PSSLRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVS HLVYENGYMK  120
QQLQTASATT TDNNSCESVV MSGQHQQQQN PTPQHPQRDA NNPAGLLAIA EETLAEFLSK  180
ATGTAVDWVQ MIGMKPGPDS IGIVAVSRNC SGVAARACGL VSLEPTKVAE ILKDRPSWFR  240
DCRCLDVLGV IPTGNGGTIE LIYMQTYAPT TLAAARDFWT LRYTTSLEDG SLVICERSLT  300
STTGGPTGPP TSNFVRAEML PSGFLIRPCE GGGSIIHIVD HVDLDVWSVP EVLRPLYESS  360
KILAQKMTIA ALRQIRQIAQ ETSGEIQYGG GRQPAVLRTF SQRLCRGFND AVNGFADDGW  420
SLMGSDGVED VTIMINSSGG KFLGSQYNTS MFPSFGGGVL CAKASMLLQN VPPALLVRFL  480
REHRSEWADH GVDTYSVACL KASPYAVPCA RPGGFPSSQV ILPLAHTVEH EEFLEVVRLE  540
GHAFTPEDVA LARDMYLLQL CSGIDENAVG ACAQLVFAPI DESFADDAPL LPSGFRVIPL  600
DPKTVMDGPG ATRTLDLAST LEVGPASNRP AGDGEPNNYN LRSVLTIAFQ FTFENHMRDN  660
VAAMARQYVR SVVGSVQRVA MAIAPSCLSS DMGSKPLPGS PEALTLARWI CRSYRIHTGG  720
ELLRVDSQAD DALLKQLWHH SDAIMCCSLK TNASPVFTFA NQAGLDMLET TLVALQDIML  780
DRILDEAGRK ILCTEFSKIM QQGFAYLPAG MCVSGMGRPV SYEQAIAWKV LNDDKAKHCL  840
ALMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein