PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724677.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 359aa MW: 39903.1 Da PI: 6.5567

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_022724677.1 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	48.4	2.2e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ XP_022724677.1 67 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKIISHD 120 VPALASFADV HSSTPLEEGF ISLNTNPNLI LSAQQDQLYL SPAAPVLQSF AHVDFKPNPN 180 NYNIDLVHHH FPLTAMLPPP SNTSPFDPSL PLPFVPQHDF DHQNQEDHVQ IISNEVVQNF 240 VSDKLIMNPA TAVDPYDHPL MDPSTVPKLC EILEGNINMP PTSVSLENFN PVVARLSSCF 300 QLSAGSTYAR DIQMATSQME CIDTIITSMP SSSSSSSLSA LSSGQYNTNP NLPSRSWDP

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKIISHD  120
VPALASFADV HSSTPLEEGF ISLNTNPNLI LSAQQDQLYL SPAAPVLQSF AHVDFKPNPN  180
NYNIDLVHHH FPLTAMLPPP SNTSPFDPSL PLPFVPQHDF DHQNQEDHVQ IISNEVVQNF  240
VSDKLIMNPA TAVDPYDHPL MDPSTVPKLC EILEGNINMP PTSVSLENFN PVVARLSSCF  300
QLSAGSTYAR DIQMATSQME CIDTIITSMP SSSSSSSLSA LSSGQYNTNP NLPSRSWDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	6e-84	MYB family protein