PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724729.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 473aa MW: 52953.8 Da PI: 10.0887

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1.1e-07	8	40	2	35
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgR 35 grW t+E++ll av ++G+++W+++a+++ +R XP_022724729.1 8 GRWGTWEELLLGGAVLRHGTRDWNLVASELR-TR 40 9****************************99.77 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MGAETITGRW GTWEELLLGG AVLRHGTRDW NLVASELRTR AVSPFAFTPE VCKAKYEDLQ 60 RRYSGCKTWF EELRKQRMAE LRQALEQSDD SIGSLESKLE NLKAEKIDDS RVDYDSSQTE 120 SALPCLKNEG VEFSSKDTYK DGLSAGSFTQ DAETNWAPDC QIRAAVPAEE MDLKPGDSLT 180 SKREKVLSID KLTDAFCGGQ LQSIRKRRGK RKRKDCSKDA KEGSVGESES LGPADVASAS 240 WYKETSASNS AQFARSSGVE DHRKCSSKEG IDDIMGIFSS VAENDCASVF RRRLDSQKRG 300 RYKKMILRHM DFDTIRSRIA SNSIMSVREL FRDMLLVANN ALVFYSKNTR EYKSALLLRH 360 IVTATLRQHF KEYEGKVPIT TFTSSRPMHK PPAKPRSIRP CNRKLPGNTA NNMNPVVENS 420 HGSKKTPNAD SPPSVESLAE TKKGSARPRK VGRGCTSQKS DSPTKGRKRT RVR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MGAETITGRW GTWEELLLGG AVLRHGTRDW NLVASELRTR AVSPFAFTPE VCKAKYEDLQ  60
RRYSGCKTWF EELRKQRMAE LRQALEQSDD SIGSLESKLE NLKAEKIDDS RVDYDSSQTE  120
SALPCLKNEG VEFSSKDTYK DGLSAGSFTQ DAETNWAPDC QIRAAVPAEE MDLKPGDSLT  180
SKREKVLSID KLTDAFCGGQ LQSIRKRRGK RKRKDCSKDA KEGSVGESES LGPADVASAS  240
WYKETSASNS AQFARSSGVE DHRKCSSKEG IDDIMGIFSS VAENDCASVF RRRLDSQKRG  300
RYKKMILRHM DFDTIRSRIA SNSIMSVREL FRDMLLVANN ALVFYSKNTR EYKSALLLRH  360
IVTATLRQHF KEYEGKVPIT TFTSSRPMHK PPAKPRSIRP CNRKLPGNTA NNMNPVVENS  420
HGSKKTPNAD SPPSVESLAE TKKGSARPRK VGRGCTSQKS DSPTKGRKRT RVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	215	RKRRGKRKRKD
2	207	217	RKRRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-28	MYB_related family protein