PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724746.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 725aa    MW: 79893.6 Da    PI: 5.8704
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.1e-1958113156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++ +e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_022724746.1  58 KKRYHRHTQRQIQDMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 113
                     688999***********************************************998 PP
2START219.89e-692474661206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el+++a+++ep+Wv      e +n de+l++f+++ +      ++ea+r+s+vv+m++++lve+l+d++ qW++ +     +a+tle
  XP_022724746.1 247 ELAVAAMEELIRMAQSGEPLWVPGEnstEVLNDDEYLRTFPRGIGpkplgMRSEASRESAVVIMNHVNLVEILMDVN-QWSRVFCgivsRAMTLE 340
                     57899*****************98888899************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q+++plvp R+ +f+Ry++q+++g+w++vdvS+d+ ++ p    + +++++pSg+li++++ng+skv+wveh++
  XP_022724746.1 341 VLSTGvagyynGALQVMTAEFQVPTPLVPtRENYFLRYCKQHTDGTWAVVDVSLDNLRPSP----LSKCRRRPSGCLIQELPNGYSKVIWVEHAE 431
                     ***********************************************************99....588888************************ PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++r+lv+s la+gak+wvatl+rqce+
  XP_022724746.1 432 VDDRAVHNIYRPLVNSDLAFGAKRWVATLDRQCER 466
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
MFSPNLFESP HIFDMTHKTS ESELVGKIRD DDYETKSGTE TMDAPSGDDQ DPNQRPKKKR  60
YHRHTQRQIQ DMEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKAQHERHE  120
NAILKAENEK LRAENNRYKE ALINATCPNC GGPAALGEMS FDEQHLRIEN ARLREEIDRL  180
SGIAAKYVGK PSTSYPHLSS NLHSRSLDLG ASNFGTQSGF VGEMYGGGDL LRSVSVPTEA  240
DKPMIVELAV AAMEELIRMA QSGEPLWVPG ENSTEVLNDD EYLRTFPRGI GPKPLGMRSE  300
ASRESAVVIM NHVNLVEILM DVNQWSRVFC GIVSRAMTLE VLSTGVAGYY NGALQVMTAE  360
FQVPTPLVPT RENYFLRYCK QHTDGTWAVV DVSLDNLRPS PLSKCRRRPS GCLIQELPNG  420
YSKVIWVEHA EVDDRAVHNI YRPLVNSDLA FGAKRWVATL DRQCERLASS MASNIPAGDL  480
CVITSPEGRK SMLKLAERMV TSFCTGVGAS TAHAWTTLST TGSDDVRVMT RKSMDDPGRP  540
PGIVLSAATS FWIPVPPKRV FDFLRDENSR SEWDILSNGG LVQEMAHIAN GRDPGNCVSL  600
LRVNSANSSQ SNMLILQESC SDATGSYVIY APVDIAAMNV VLSGGDPDYV ALLPSGFAIL  660
PDGPGLNSEG ILEIGSGGSL LTVAFQILVD SVPTAKLSLG SVTTVNSLIK CTVERIKAAV  720
MCDHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein