PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725139.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 287aa MW: 32895.8 Da PI: 6.1759

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.7	2e-18	82	134	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++ eq+++Le+ Fe ++++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_022725139.1 82 KRRLNMEQVKTLEKNFEFCNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 134 447999**********************************************9 PP
2	HD-ZIP_I/II	126.2	1.5e-40	80	170	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 e+krrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++ +++L++e+ XP_022725139.1 80 ERKRRLNMEQVKTLEKNFEFCNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDALQALNQKLHAEI 170 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MSCNGMAFFP ANFILQTPHE EDHHQPSTSI DQMLPPCTSQ DFRGVASFQG KRSMSFSRID 60 VCEEANGEDD LSDDGSQAGE RKRRLNMEQV KTLEKNFEFC NKLEPERKMQ LARALGLQPR 120 QIAIWFQNRR ARWKTKQLEK DYDLLKRQYE AIKADNDALQ ALNQKLHAEI LALKNREPTE 180 SINLNKETEG SCSNRSENSS DVKLDISRTP AIDSPSSTHP TSRNLFPTSL RPTGGGVAQL 240 FQTTPRPDHL QCQKMDQMVK EESLSNMFCS IEDQTGFWPW LEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	ERKRRL
2	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-117	HD-ZIP family protein