PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725329.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 489aa MW: 54268.9 Da PI: 8.3622

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.5e-09	233	279	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR++i +++ L++l+P + +k Ka +L + + Y++sLq XP_022725329.1 233 HSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEITSYVQSLQ 279 999*********************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MTVLERQKAP LQRQQEQLQQ QEKQQQSYFS ELRGVFSNQT SHVQGLQGGL LSGDSLLCDM 60 VMTPQAKPDP GLETARSELG NIDIAGMGFG QCGYVNGPSF DMNYAIYRTS SCPPAVVAAA 120 VATEGVEAKG KESVESEKLG SAIGRESFKK RKADKLHCSK VVAEDDSKRI KACAEERESK 180 ITGPNTNKSS SSNNNNKKQT STETSKENSK FSKVQKPDYI HVRARRGQAT DRHSLAERVR 240 REKISERMKY LQDLVPGCNK ITGKAGMLDE ITSYVQSLQQ QVELLSMKLA AVNPKLDFNI 300 DNLFAKQVRQ NPAAVLHFSV TNYAGIVCSR QLFASCTTTF PTVGMLSEMA NPPYLQFNPV 360 QQVVSCREVE MGMGMGMEIN SPDMALQRTI NAPLSIPDAS FLDSSCLAVI FPSPFYSCAL 420 LSSTVFTIFL TIDQHSQCSN FNPLQHGMLN CKIFTMWDLT RKDQQHPFHL NHLQVQKANT 480 SLLMLSFLF

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MTVLERQKAP LQRQQEQLQQ QEKQQQSYFS ELRGVFSNQT SHVQGLQGGL LSGDSLLCDM  60
VMTPQAKPDP GLETARSELG NIDIAGMGFG QCGYVNGPSF DMNYAIYRTS SCPPAVVAAA  120
VATEGVEAKG KESVESEKLG SAIGRESFKK RKADKLHCSK VVAEDDSKRI KACAEERESK  180
ITGPNTNKSS SSNNNNKKQT STETSKENSK FSKVQKPDYI HVRARRGQAT DRHSLAERVR  240
REKISERMKY LQDLVPGCNK ITGKAGMLDE ITSYVQSLQQ QVELLSMKLA AVNPKLDFNI  300
DNLFAKQVRQ NPAAVLHFSV TNYAGIVCSR QLFASCTTTF PTVGMLSEMA NPPYLQFNPV  360
QQVVSCREVE MGMGMGMEIN SPDMALQRTI NAPLSIPDAS FLDSSCLAVI FPSPFYSCAL  420
LSSTVFTIFL TIDQHSQCSN FNPLQHGMLN CKIFTMWDLT RKDQQHPFHL NHLQVQKANT  480
SLLMLSFLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	7e-46	bHLH family protein