PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725330.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 478aa MW: 53119.5 Da PI: 7.8111

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.3e-09	246	292	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR++i +++ L++l+P + +k Ka +L + + Y++sLq XP_022725330.1 246 HSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEITSYVQSLQ 292 999*********************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MNNAFPEILQ CSDMTVLERQ KAPLQRQQEQ LQQQEKQQQS YFSELRGVFS NQTSHVQGLQ 60 GGLLSGDSLL CDMVMTPQAK PDPGLETARS ELGNIDIAGM GFGQCGYVNG PSFDMNYAIY 120 RTSSCPPAVV AAAVATEGVE AKGKESVESE KLGSAIGRES FKKRKADKLH CSKVVAEDDS 180 KRIKACAEER ESKITGPNTN KSSSSNNNNK KQTSTETSKE NSKFSKVQKP DYIHVRARRG 240 QATDRHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEITSYVQS LQQQVELLSM 300 KLAAVNPKLD FNIDNLFAKQ LFASCTTTFP TVGMLSEMAN PPYLQFNPVQ QVVSCREVEM 360 GMGMGMEINS PDMALQRTIN APLSIPDASF LDSSCLAVIF PSPFYSCALL SSTVFTIFLT 420 IDQHSQCSNF NPLQHGMLNC KIFTMWDLTR KDQQHPFHLN HLQVQKANTS LLMLSFLF

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MNNAFPEILQ CSDMTVLERQ KAPLQRQQEQ LQQQEKQQQS YFSELRGVFS NQTSHVQGLQ  60
GGLLSGDSLL CDMVMTPQAK PDPGLETARS ELGNIDIAGM GFGQCGYVNG PSFDMNYAIY  120
RTSSCPPAVV AAAVATEGVE AKGKESVESE KLGSAIGRES FKKRKADKLH CSKVVAEDDS  180
KRIKACAEER ESKITGPNTN KSSSSNNNNK KQTSTETSKE NSKFSKVQKP DYIHVRARRG  240
QATDRHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEITSYVQS LQQQVELLSM  300
KLAAVNPKLD FNIDNLFAKQ LFASCTTTFP TVGMLSEMAN PPYLQFNPVQ QVVSCREVEM  360
GMGMGMEINS PDMALQRTIN APLSIPDASF LDSSCLAVIF PSPFYSCALL SSTVFTIFLT  420
IDQHSQCSNF NPLQHGMLNC KIFTMWDLTR KDQQHPFHLN HLQVQKANTS LLMLSFLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	5e-46	bHLH family protein