PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022725434.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 319aa    MW: 36393.5 Da    PI: 6.8481
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022725434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.9e-182168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll+++++ +G g+W++ a++ g++Rt+k+c++rw++yl
   XP_022725434.1 21 RGPWTLEEDTLLINYIASHGEGRWNLLAKRAGLRRTGKSCRLRWLNYL 68
                     89********************************************97 PP
2Myb_DNA-binding50.26.1e-1674117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022725434.1  74 RGNLTPQEQFLILELHSKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 117
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSSFRKSGAS SSEDDAEQLR RGPWTLEEDT LLINYIASHG EGRWNLLAKR AGLRRTGKSC  60
RLRWLNYLKP DVKRGNLTPQ EQFLILELHS KWGNRWSRIA QHLPGRTDNE IKNYWRTRVE  120
KQARHLKIDS NSAAFQNLIR CNWMPRLLQK MEESSSVSSM TSENLTVPPL LDQISQHEAL  180
TTVQQAPRHG PRNLNEAVQS LHQLEQNSDS EHSAASSCVS SSESMKNISK ISQFAEYQTN  240
PYRIIGNNDY NTLSKDCYYF DNNSSCYNME AINLASTSAL GDFASPVGDC HMAENNWVDD  300
GFADGLWSMG ELWELKSFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.11e-77MYB family protein