PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725575.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 355aa MW: 39216.4 Da PI: 9.6411

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll +++q+G g+W + +++ g+ R++k+c++rw +yl XP_022725575.1 15 RGPWTAEEDKLLTAYIQQHGHGSWPALPEKAGLQRCGKSCRLRWINYL 62 89********************************************97 PP
2	Myb_DNA-binding	45.8	1.4e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ ++++ ++lG++ W+ a++++ +Rt++++k++w+++l XP_022725575.1 68 RGKFSLQEEQTIIQLRALLGNR-WSVMAAHLP-KRTDNEIKNHWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MRRSPNCKKD VVLKRGPWTA EEDKLLTAYI QQHGHGSWPA LPEKAGLQRC GKSCRLRWIN 60 YLRRDIKRGK FSLQEEQTII QLRALLGNRW SVMAAHLPKR TDNEIKNHWN THLKKRLIKI 120 GVDPITHKPR TDASSFPSGS GKYASNLSHM AQRESARLEA EARLVRESKQ VVPKPIQPKN 180 QLTRLLLTRL SNNSTATPGR PMCLDVLKAW QGVIAGMFAF SSQDLGSLTS TPSFPDGTVR 240 APIIGLTATG STDGEMGFDK STSAGWGETA MELHSNGRTG FSNDAWFEDS VFDVGNENVA 300 IANIMEGLSD ALIFNSDPLT AVEKSNESGN IVENSNCWDS VLNLVNSSPY GSPVF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MRRSPNCKKD VVLKRGPWTA EEDKLLTAYI QQHGHGSWPA LPEKAGLQRC GKSCRLRWIN  60
YLRRDIKRGK FSLQEEQTII QLRALLGNRW SVMAAHLPKR TDNEIKNHWN THLKKRLIKI  120
GVDPITHKPR TDASSFPSGS GKYASNLSHM AQRESARLEA EARLVRESKQ VVPKPIQPKN  180
QLTRLLLTRL SNNSTATPGR PMCLDVLKAW QGVIAGMFAF SSQDLGSLTS TPSFPDGTVR  240
APIIGLTATG STDGEMGFDK STSAGWGETA MELHSNGRTG FSNDAWFEDS VFDVGNENVA  300
IANIMEGLSD ALIFNSDPLT AVEKSNESGN IVENSNCWDS VLNLVNSSPY GSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-88	MYB family protein