PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725604.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 241aa MW: 26944.1 Da PI: 9.5206

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.4	1e-20	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v+ +G ++W++I+r ++ gR++k+c++rw + XP_022725604.1 9 KGPWSPEEDELLRKLVEHHGARNWSLISRLIP-GRSGKSCRLRWCNQ 54 79****************************.*********985 PP
2	Myb_DNA-binding	57.4	3.4e-18	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEd ++++a++++G++ W+tIar ++ gRt++ +k++w++ XP_022725604.1 61 RRPFTPEEDGIILKAHAKYGNK-WATIARLLN-GRTDNAIKNHWHST 105 679*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MDQDFDRVKG PWSPEEDELL RKLVEHHGAR NWSLISRLIP GRSGKSCRLR WCNQLSPEVE 60 RRPFTPEEDG IILKAHAKYG NKWATIARLL NGRTDNAIKN HWHSTLKRKL SMEDGDSLQE 120 SEKRSAKSPR TATSNNTGSP SGSDVSDLGL SVAESTQHSG VSTKLTLGRS WNESIEFNNN 180 SSPGKNESLA EKQESGRKMT TLGPDLLAAI QEIIRKEVRD YMAEFGFLSE STRNAGIKRI 240 G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	7e-70	MYB family protein