PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725649.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 472aa MW: 51986.2 Da PI: 8.4852

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.4	6.3e-41	181	258	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v gle rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q XP_022725649.1 181 RCQVEGCNLDLSSAKDYHRKHRVCESHSKSPKVIVGGLECRFCQQCSRFHALSEFDEKKRSCRRRLSDHNARRRKPQV 258 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEWNAKTPLQ WHCENLMMLN ATPKEIPRKL RPVEWDIDGE GGMDSGSLYS SVAAGGICGS 60 GSDLGLASLS KNSKSASINS SSMGEIRATK LTSESFEAIP DDSSNKKEAS KVEPTGTSPT 120 LEVSVGSGEP LLSLKLGKRT YFEDVCAGNN ARNSSYSATP GPSPTSAKRS KPSCRDTHVQ 180 RCQVEGCNLD LSSAKDYHRK HRVCESHSKS PKVIVGGLEC RFCQQCSRFH ALSEFDEKKR 240 SCRRRLSDHN ARRRKPQVEA AHFNAARLSS SSYDGKQQMS FVWNKVPSLY NAKPYENFTW 300 EDIIGSKPSL MKGCTPTKVG NVNGQLQLPG NQPFNSIKMR CHDSNRFLPA KGWHNTAEVL 360 NQGVEESTVM GTTQELHRAL SLLSNDSCVS CGPKHGSLAY SMHVNPASMS QPAMNAISRG 420 FPRALSENWQ MEQQTTGSQV HTALHSDSEN HFQEFQLLMA PHYSAFYSNH MN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEWNAKTPLQ WHCENLMMLN ATPKEIPRKL RPVEWDIDGE GGMDSGSLYS SVAAGGICGS  60
GSDLGLASLS KNSKSASINS SSMGEIRATK LTSESFEAIP DDSSNKKEAS KVEPTGTSPT  120
LEVSVGSGEP LLSLKLGKRT YFEDVCAGNN ARNSSYSATP GPSPTSAKRS KPSCRDTHVQ  180
RCQVEGCNLD LSSAKDYHRK HRVCESHSKS PKVIVGGLEC RFCQQCSRFH ALSEFDEKKR  240
SCRRRLSDHN ARRRKPQVEA AHFNAARLSS SSYDGKQQMS FVWNKVPSLY NAKPYENFTW  300
EDIIGSKPSL MKGCTPTKVG NVNGQLQLPG NQPFNSIKMR CHDSNRFLPA KGWHNTAEVL  360
NQGVEESTVM GTTQELHRAL SLLSNDSCVS CGPKHGSLAY SMHVNPASMS QPAMNAISRG  420
FPRALSENWQ MEQQTTGSQV HTALHSDSEN HFQEFQLLMA PHYSAFYSNH MN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	255	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-84	SBP family protein