PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725712.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ERF

Protein Properties

Length: 738aa MW: 81832.5 Da PI: 10.0003

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.9	8.2e-16	123	166	2	49
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 + GVr++k +g+W+AeIr+p + ++r++lg+++t e+Aaka++a XP_022725712.1 123 KPVGVRQRK-WGKWAAEIRHPLK---KTRIWLGTYDTLEDAAKAYDAK 166 789***9.******743...5*****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MPESRKQSMN LNKSCKKSKK ILSILTEEEI QMTRKIRVIF HDPYATDSSS SEDESERTVA 60 RKAPRGKRVV REIKVPAPGL APQSKPLESE GSSQDSNSKT PTSKKRVLSK TLEDKALVAK 120 TKKPVGVRQR KWGKWAAEIR HPLKKTRIWL GTYDTLEDAA KAYDAKKWEG YADWRNRPAL 180 RGRHGGMLAA SFVLVVEVLE NLAYLANASN LVLYLSKHMH LSPSKSANNV TNFMGTAFLL 240 ALLGGCLSDA FFTTYHIYLI SALIEFLGLI ILAMQARTPS LKPPECNPST PSNPCQEVGG 300 GKAAMLFIGL YLVALGVGGI KGSLPTHGAE QFDESTPQGR KQRSTFFNYF IFCLSCGALI 360 AVTFVVWIED NKGWEWGFAI STVAILLSIP IFLVGSTFYR NKIPFGSPLK TISKVLVAAM 420 LNSCMSRSPR NAIAYLAASP YYPTETSKEA EDNAKQSKQP DQIPTESLKF LNRAVVNKPA 480 NPAFECSLQQ VEEVKIVLKI LPIFACTIVI NCCLAQLSTF SVEQAATMNS KLGSLKIPPA 540 SLPVFPVVFI MILAPVYDHF IIPFARKVTK TEMGITHLQR IGIGLFLSII AMAVAALVEI 600 KRKRVATDSG LLDSTNPLPI TFFWIALQYL FLGSADLFTL TGLLEFFFTE APSSMRSLAT 660 SLSWASLAMG YYLSSVIVSI VNNLTDNSGH KPWLSGHTIN HYHLERFYWL MCVLSALNFL 720 HYLFRAMRYK YRSAGPTK

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MPESRKQSMN LNKSCKKSKK ILSILTEEEI QMTRKIRVIF HDPYATDSSS SEDESERTVA  60
RKAPRGKRVV REIKVPAPGL APQSKPLESE GSSQDSNSKT PTSKKRVLSK TLEDKALVAK  120
TKKPVGVRQR KWGKWAAEIR HPLKKTRIWL GTYDTLEDAA KAYDAKKWEG YADWRNRPAL  180
RGRHGGMLAA SFVLVVEVLE NLAYLANASN LVLYLSKHMH LSPSKSANNV TNFMGTAFLL  240
ALLGGCLSDA FFTTYHIYLI SALIEFLGLI ILAMQARTPS LKPPECNPST PSNPCQEVGG  300
GKAAMLFIGL YLVALGVGGI KGSLPTHGAE QFDESTPQGR KQRSTFFNYF IFCLSCGALI  360
AVTFVVWIED NKGWEWGFAI STVAILLSIP IFLVGSTFYR NKIPFGSPLK TISKVLVAAM  420
LNSCMSRSPR NAIAYLAASP YYPTETSKEA EDNAKQSKQP DQIPTESLKF LNRAVVNKPA  480
NPAFECSLQQ VEEVKIVLKI LPIFACTIVI NCCLAQLSTF SVEQAATMNS KLGSLKIPPA  540
SLPVFPVVFI MILAPVYDHF IIPFARKVTK TEMGITHLQR IGIGLFLSII AMAVAALVEI  600
KRKRVATDSG LLDSTNPLPI TFFWIALQYL FLGSADLFTL TGLLEFFFTE APSSMRSLAT  660
SLSWASLAMG YYLSSVIVSI VNNLTDNSGH KPWLSGHTIN HYHLERFYWL MCVLSALNFL  720
HYLFRAMRYK YRSAGPTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	1e-28	ERF family protein