PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725793.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 270aa MW: 30757.5 Da PI: 6.3621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ +++ g+ R++k+c++rw +yl XP_022725793.1 14 KGTWTPEEDRKLKAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	52.6	1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+e +++ ++ lG++ W++Ia+ ++ gRt++++k++w++ XP_022725793.1 67 RGNYSKEEEEAIIRFHESLGNR-WSAIAAQLP-GRTDNEIKNHWHTT 111 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MVRTPCCDKN GLRKGTWTPE EDRKLKAYVT RYGCWNWRQL PKYAGLARCG KSCRLRWMNY 60 LRPDIKRGNY SKEEEEAIIR FHESLGNRWS AIAAQLPGRT DNEIKNHWHT TLKKRFKHKP 120 LATKDVKDNS QGPVILEDGT SKEKEETKLN NHLLINPTSP PLILESSLSS QQPASSDQNS 180 SITTDSTLAS SKDSVSDNNY NNNTALFDTY EANSGNFWTE PFFGDSCYMS SDMLVSMMMD 240 PAGYEAEFPL LEGEILCPFG LYDQLEGLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-60	MYB family protein