PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725801.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 240aa MW: 27618.3 Da PI: 6.6769

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.7	2e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gklye++s XP_022725801.1 9 KRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	99.1	6.4e-33	82	174	8	100
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e+ +++s +qe+ kLk+++e Lq++qRh+lGed+++L keL+qLe+qL+ slk+iRs K++++++q++elq+ke+ l e+n+ L++kl+e XP_022725801.1 82 QTENDTQQSKYQEYLKLKAKVEVLQHSQRHFLGEDIGDLGSKELEQLEHQLDFSLKQIRSSKMQFMFDQLSELQRKEEILLETNRILKRKLDE 174 4677789999********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MGRGRVELKR IENKISRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLYEFCST 60 SSMAKTIERY HWCSYGALEP GQTENDTQQS KYQEYLKLKA KVEVLQHSQR HFLGEDIGDL 120 GSKELEQLEH QLDFSLKQIR SSKMQFMFDQ LSELQRKEEI LLETNRILKR KLDESTSTLQ 180 SSWEIGEQSI PYNHPPPQSE GFFEPLQCSS SLQIGYNPTV TDQATATPSA PSEFIPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-101	MIKC_MADS family protein