PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725846.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GeBP

Protein Properties

Length: 385aa MW: 42744 Da PI: 4.6292

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	128.6	2.5e-40	149	242	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 rlwse Dei++L+G+i++k+k+g++p++d ++f++f+k+si+++vsk ql+eKirrLKkK+k++++k ++g++p+fsk+hd+k+felskkiWg XP_022725846.1 149 ARLWSEADEIAILKGMIEYKSKKGSDPYADSSGFHDFIKQSIQADVSKYQLSEKIRRLKKKYKTNSEKCQNGNDPVFSKPHDHKSFELSKKIWG 242 69*******************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MARKRPIEDP PSASSSEDEE EDESSQGNSS AEGDDEPQND AIEEDEEEEE EEQDEEAGDQ 60 EKTPLKTQKS DSDNVGSDSE SDSDKSLPSP NASDFTIKPI VSKPNKSAPK SNPKPKPIAL 120 ESSSKQRRTA ASASNGGGGG GSVKTPGTAR LWSEADEIAI LKGMIEYKSK KGSDPYADSS 180 GFHDFIKQSI QADVSKYQLS EKIRRLKKKY KTNSEKCQNG NDPVFSKPHD HKSFELSKKI 240 WGNETNEKSN KRQKTMKTLT SKDEGESEFN GAITLGLPCF VKDKEVNADV STHVSSGSEE 300 EKVDFWKDYP CLKESFETGK WGLAGGFLME LLEKNDGEIG REKLREMERV WRELKTKQLE 360 LYLKRLELVQ EMAQAALDVV KGSEI

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MARKRPIEDP PSASSSEDEE EDESSQGNSS AEGDDEPQND AIEEDEEEEE EEQDEEAGDQ  60
EKTPLKTQKS DSDNVGSDSE SDSDKSLPSP NASDFTIKPI VSKPNKSAPK SNPKPKPIAL  120
ESSSKQRRTA ASASNGGGGG GSVKTPGTAR LWSEADEIAI LKGMIEYKSK KGSDPYADSS  180
GFHDFIKQSI QADVSKYQLS EKIRRLKKKY KTNSEKCQNG NDPVFSKPHD HKSFELSKKI  240
WGNETNEKSN KRQKTMKTLT SKDEGESEFN GAITLGLPCF VKDKEVNADV STHVSSGSEE  300
EKVDFWKDYP CLKESFETGK WGLAGGFLME LLEKNDGEIG REKLREMERV WRELKTKQLE  360
LYLKRLELVQ EMAQAALDVV KGSEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-27	GeBP family protein