PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725895.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 265aa MW: 30031.5 Da PI: 5.614

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l ++ ++G +W+ +++ g++R++k+c++rw +yl XP_022725895.1 14 KGAWSPEEDHKLRSYILRYGHWNWRELPKYAGLKRCGKSCRLRWMNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	53.8	4.5e-17	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T+eEd l+ +++++ G++ W+tIa+ ++ gRt++++k++w+++l XP_022725895.1 68 GNYTEEEDALIMKLHEEIGNK-WSTIAASLP-GRTDNEIKNHWHTHL 112 789****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MVRAPFYDKN GVKKGAWSPE EDHKLRSYIL RYGHWNWREL PKYAGLKRCG KSCRLRWMNY 60 LRPEVKHGNY TEEEDALIMK LHEEIGNKWS TIAASLPGRT DNEIKNHWHT HLKKRAKRNL 120 TLPDGKEYSS STSQSEATHN SEGEAESVLI VDTPPNMILE SSPWSPATPS STELSSVCSN 180 TGSISSLNAI GGMEDICLRS LSEIYEAQCS TGDFWSEPFV ADNVYNQDSY PSSLENGGFG 240 LPLLFDMNYD DDSVYLLYQS MKGWA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-58	MYB family protein