PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725918.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 308aa MW: 33367 Da PI: 9.6004

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134	4.9e-42	24	100	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCevhsk+p+v+v+g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ XP_022725918.1 24 CLVDGCTADLSKCRDYHRRHKVCEVHSKTPKVTVRGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQP 100 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MDSSSSTSFK RARAPGSGNQ VPSCLVDGCT ADLSKCRDYH RRHKVCEVHS KTPKVTVRGQ 60 EQRFCQQCSR FHSLVEFDEG KRSCRKRLDG HNRRRRKPQP DSLSVNSGRF LSNHPGTRYL 120 PFSSPQMFST NAITCSWAGA VKVETDRSSE LNFSGRNNLF PGSSSHNYKG EKQLSFLQSS 180 SSSFPGVSVC QPLLDSNPSS KNGGSSQKMF SNGLNQVIDS NRALSLLSSQ PAETREIALS 240 PMVQSGPASS LTPNLQYNGL GMQGEQVGTI VATDGSGNTN LHGLEMLGTG HPGSSASGTH 300 QTLSFSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	98	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-49	SBP family protein