PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022725922.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 28117.8 Da    PI: 7.5659
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022725922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.88e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr+g+ KKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_022725922.1  9 KRIENKINRQVTFSKRRAGLSKKAHEISVLCDAEVALIVFSHKGKLFEYST 59
                    79***********************************************96 PP
2K-box1072.2e-35751741100
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y++++ +++e+  + +++ e+++Lk+++e Lq+++Rh++GedL+sLslkeLq+LeqqL+++lk+i skKn+l++e+i+elq+kek++qe+n++L 
  XP_022725922.1  75 YAETQLVATESDSQGNWSIEYNRLKAKVELLQKNHRHYMGEDLDSLSLKELQNLEQQLDTALKHIQSKKNQLMYESISELQRKEKAIQEQNTMLA 169
                     566777888888899******************************************************************************** PP

           K-box  96 kklee 100
                     k+++e
  XP_022725922.1 170 KQIQE 174
                     **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRAGLSK KAHEISVLCD AEVALIVFSH KGKLFEYSTD  60
SCMEKILERY ERYSYAETQL VATESDSQGN WSIEYNRLKA KVELLQKNHR HYMGEDLDSL  120
SLKELQNLEQ QLDTALKHIQ SKKNQLMYES ISELQRKEKA IQEQNTMLAK QIQEREKTAA  180
QQLQWGQQQD HGLNASSSFL LPQPHPCLNI GGTYQEEATE VRRNELDLTL EPIYSCHLGC  240
FAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-128MIKC_MADS family protein