PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725987.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 368aa MW: 40065.4 Da PI: 7.073

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126	3.9e-39	51	188	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++h+kv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s ++s+s+ s++ XP_022725987.1 51 PPKRTPTKDRHSKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRNSGSSMSAShlrntyf 145 789******************************************************************99976666666666444445555677 PP TCP 89 .....................kaaksaakskksqksaasalnlak 112 ++++s+++++ +++++ ln+ + XP_022725987.1 146 npnfctqqlrmrsewerdlldDSSSSQQQRRILSSEDS--LNFPA 188 77777777777777776666422222222222222222..44444 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MIMDGENGIR RTNFPLQLLE NKEQQQEQPC SNNVNDETSS KATSEASKKP PPKRTPTKDR 60 HSKVEGRGRR IRMPATCAAR VFQLTRELGH KSDGETIEWL LQQAEPAVIA ATGTGTIPAN 120 FTSLNISLRN SGSSMSASHL RNTYFNPNFC TQQLRMRSEW ERDLLDDSSS SQQQRRILSS 180 EDSLNFPASS SSVNAFLQAK QELRDSSLAV SEEAVTSIGK KRKPEQQELS ENQMGSYLIQ 240 STIGSIPSSH NLIPTTFWMV TNPSNQAISG SGAGDPMWTF PPASNTNMYR GTMSSGVNFM 300 NFATPMALLP GQESGSGIAA GGSVTDSHLG VVEALHPYKP IPGSSVSESP ASRSHQHHGG 360 EDRHDSTS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MIMDGENGIR RTNFPLQLLE NKEQQQEQPC SNNVNDETSS KATSEASKKP PPKRTPTKDR  60
HSKVEGRGRR IRMPATCAAR VFQLTRELGH KSDGETIEWL LQQAEPAVIA ATGTGTIPAN  120
FTSLNISLRN SGSSMSASHL RNTYFNPNFC TQQLRMRSEW ERDLLDDSSS SQQQRRILSS  180
EDSLNFPASS SSVNAFLQAK QELRDSSLAV SEEAVTSIGK KRKPEQQELS ENQMGSYLIQ  240
STIGSIPSSH NLIPTTFWMV TNPSNQAISG SGAGDPMWTF PPASNTNMYR GTMSSGVNFM  300
NFATPMALLP GQESGSGIAA GGSVTDSHLG VVEALHPYKP IPGSSVSESP ASRSHQHHGG  360
EDRHDSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-52	TCP family protein