PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725989.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 354aa MW: 39472.3 Da PI: 6.5016

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++++ +G+ +W+t ++ g+ R++k+c++rw +yl XP_022725989.1 14 KGPWTPEEDLKLTNYIQSHGPANWHTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_022725989.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRTPCCDKN GLKKGPWTPE EDLKLTNYIQ SHGPANWHTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKNG 120 IDPVTHAPRL DFLDLSSILS STLCNQSLLN VSNLLGTQAL LNPELLRLAH TLLSLKQENP 180 EILLQYLQQS QLCDSQQNLV PSQLQPSQLQ DPIQSASTCT TSTIPCTSVL SQTELMQAAG 240 EGFSSNMTNF SYPNFQENLT ASTLINAFVS QPNYVHCSPN PTVPLVSENS NFQSLGGSHN 300 FSFDSVRSTP ISSPTPLNSS STFINSSSTD DERESFSSLL KFEIPESLDI NDFL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRTPCCDKN GLKKGPWTPE EDLKLTNYIQ SHGPANWHTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKNG  120
IDPVTHAPRL DFLDLSSILS STLCNQSLLN VSNLLGTQAL LNPELLRLAH TLLSLKQENP  180
EILLQYLQQS QLCDSQQNLV PSQLQPSQLQ DPIQSASTCT TSTIPCTSVL SQTELMQAAG  240
EGFSSNMTNF SYPNFQENLT ASTLINAFVS QPNYVHCSPN PTVPLVSENS NFQSLGGSHN  300
FSFDSVRSTP ISSPTPLNSS STFINSSSTD DERESFSSLL KFEIPESLDI NDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G05100.1	1e-87	MYB family protein