PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022725996.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 313aa    MW: 35860.2 Da    PI: 5.7724
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022725996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.5e-182067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll ++v+++G g+W+  a++ g++Rt+k+c++rw++yl
   XP_022725996.1 20 RGPWTLEEDTLLTHYVARYGEGRWNMLAKCAGLKRTGKSCRLRWLNYL 67
                     89********************************************97 PP
2Myb_DNA-binding52.61.1e-1673116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022725996.1  73 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MPPVTKSMSI PIEEDSELRR GPWTLEEDTL LTHYVARYGE GRWNMLAKCA GLKRTGKSCR  60
LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
QARQLNIESN SKRFLEAVRC FWMPRLLQKV EQTSSSSSSL KEISYQSSVP SQLSDCTYPS  180
LSTFSPLPNK ITDNSNNSFE NSSSVTSQSL YPTDFMNISE QTQISQHLTS PIVYADPCVY  240
NNNQILNESY NIDSSGYGME GFSLASISAV GSYERSPSEC QMVEGNWISN EMTDTLWNMD  300
DIWQFGELGE MSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.15e-91MYB family protein