PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726133.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 505aa MW: 55925.8 Da PI: 7.8601

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.6	1.1e-40	165	240	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk XP_022726133.1 165 CCQVYGCNQDLSSSKDYHKRHKVCEAHSKTAKVVVNGIEQRFCQQCSRFHLLPEFDDGKRSCRKRLAGHNERRRKL 240 6*************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MESWSYGSEG KGLLFTDEMD FPVDAFARGR RALIGWDLKP SNDFEAVESM ELMDFGFADM 60 NKKPFYGNPS MGTFAAEFGN DSGKRVASPS CMITSSSYYE EESGSKHSSS LMESNSQESS 120 LIDLKLGRLT DYRDAQAGKF IKETSVVSSI RPALMAKKAR TTSFCCQVYG CNQDLSSSKD 180 YHKRHKVCEA HSKTAKVVVN GIEQRFCQQC SRFHLLPEFD DGKRSCRKRL AGHNERRRKL 240 HFNTFSGKSH KLLQSCQGTK FPRTSIPKGA PFVVPNIFQD DFVYPERYDH TNQCQQVKSE 300 EKLVYSPQSA KLITNDRFLP KSFFHMHGSG KQCIPGTSSS ATEAFNTPNA AATVKEFPGV 360 SCTDCALSLL SAQSQNFSSH GTGIQMSRPL IGQACHAHHS SGKSAAVCSL EKEKGFYSCG 420 MNPMGAASVV VSDAGYTVNF EGQAEGYFQD SDLLSAKYCL SPENGSTVDL LQLSTLLQRV 480 ERQRNSMQVK QENEDLCSFL TTYSV

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MESWSYGSEG KGLLFTDEMD FPVDAFARGR RALIGWDLKP SNDFEAVESM ELMDFGFADM  60
NKKPFYGNPS MGTFAAEFGN DSGKRVASPS CMITSSSYYE EESGSKHSSS LMESNSQESS  120
LIDLKLGRLT DYRDAQAGKF IKETSVVSSI RPALMAKKAR TTSFCCQVYG CNQDLSSSKD  180
YHKRHKVCEA HSKTAKVVVN GIEQRFCQQC SRFHLLPEFD DGKRSCRKRL AGHNERRRKL  240
HFNTFSGKSH KLLQSCQGTK FPRTSIPKGA PFVVPNIFQD DFVYPERYDH TNQCQQVKSE  300
EKLVYSPQSA KLITNDRFLP KSFFHMHGSG KQCIPGTSSS ATEAFNTPNA AATVKEFPGV  360
SCTDCALSLL SAQSQNFSSH GTGIQMSRPL IGQACHAHHS SGKSAAVCSL EKEKGFYSCG  420
MNPMGAASVV VSDAGYTVNF EGQAEGYFQD SDLLSAKYCL SPENGSTVDL LQLSTLLQRV  480
ERQRNSMQVK QENEDLCSFL TTYSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-55	SBP family protein