PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726217.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 236aa    MW: 25864.6 Da    PI: 9.0785
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.55.6e-304107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C++lr++C+++C+++p++     p++q++++ +++k++G++ +l+l++a pe+ r+++++sl+yeA+ r+ +PvyG+vg+++++++  +q+
  XP_022726217.1   4 SCNGCRILRKGCSESCIIRPCLqwiksPDSQANATLFLAKFYGRAGLLNLIEAGPENLRPAIFRSLLYEACGRVVNPVYGSVGMLWSGNWAECQA 98 
                     6********************************************************************************************** PP

          DUF260  91 kaelallke 99 
                     +++++l ++
  XP_022726217.1  99 AVDAVLEGS 107
                     999887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MRMSCNGCRI LRKGCSESCI IRPCLQWIKS PDSQANATLF LAKFYGRAGL LNLIEAGPEN  60
LRPAIFRSLL YEACGRVVNP VYGSVGMLWS GNWAECQAAV DAVLEGSPIT QTSYSESLAQ  120
QPISHLKTYD IRHVSKDPKP ADIGKVKTRT RFKRSATRSK RQVGSPSNDS WMSQFANGDS  180
KEDESMFSGE TVEGSLVNQT KKVPAFKFAS QIKESTDVGL ELTLGLAPAA TQLPHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.11e-86LBD family protein