PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726243.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 342aa MW: 39169.4 Da PI: 9.4122

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.7	6.6e-14	26	70	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + + G+++W+ Ia+++ +t qc+ rw++yl XP_022726243.1 26 TWTQEEDDILREQISLNGTENWAIIASKFK-DKTTRQCRRRWYTYL 70 6**************************9.***********97 PP
2	Myb_DNA-binding	44.3	4.2e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022726243.1 76 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 119 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MQEIKKKNCG AGSNEDSKKK ERHIVTWTQE EDDILREQIS LNGTENWAII ASKFKDKTTR 60 QCRRRWYTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL 120 CKKRAKYEAL AKENTTCINP NNKRILLRNG FNTDGTTECT APVKRMRRSH ISDLSGNCNF 180 GDRAHRVSAT IINQQQRHPF AVLGQNLHNV INVLVQSQVN NVKEVSDDAA QNNRIQGTFF 240 KQDDPMITAL MQQAELLSSL ALKVNTDNTD QSLENAWMVR SNFVYSICFC VTNIQCYQSG 300 SFTVSKVLSL KYRGTNSPFY VLHVPKLHPM LFSDSPRFFE SE

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MQEIKKKNCG AGSNEDSKKK ERHIVTWTQE EDDILREQIS LNGTENWAII ASKFKDKTTR  60
QCRRRWYTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL  120
CKKRAKYEAL AKENTTCINP NNKRILLRNG FNTDGTTECT APVKRMRRSH ISDLSGNCNF  180
GDRAHRVSAT IINQQQRHPF AVLGQNLHNV INVLVQSQVN NVKEVSDDAA QNNRIQGTFF  240
KQDDPMITAL MQQAELLSSL ALKVNTDNTD QSLENAWMVR SNFVYSICFC VTNIQCYQSG  300
SFTVSKVLSL KYRGTNSPFY VLHVPKLHPM LFSDSPRFFE SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-126	MYB family protein