PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726340.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 305aa    MW: 33743.6 Da    PI: 10.1261
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.55.7e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_022726340.1  5 KQKWTPEEEAALKAGVIKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGAPKQKWTP EEEAALKAGV IKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSRDKAR LAVKRTSSIP KQEESAMALS VVASDEEIVD VKPMATSSAT MQIPTSTKRS  120
IVRLDSLIIE AITSLKEPGG SNKTTIAAYI EEQYWAPLDF KRLLSAKLKY LTACGRLIKV  180
KRRYRIAPAL SFSERRRNHF MPFSEGRQRV SPRFDRDDFN ILTKSQIDLE LARIRTMTPQ  240
EAAAAAARAV AEAEAAIAEA EEAAREAEVA EADAEAAQAF AEAALKTLKG RNNQKVVELE  300
HKSGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-108MYB_related family protein