PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726351.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 213aa    MW: 23139.4 Da    PI: 8.3266
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.51.2e-292103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l++ +     p++q++++ +v+k+FG++ ++++l+++p+ +r+++++sl++eA  ra +Pv+Gavg++++++++++q+
  XP_022726351.1   2 SCNGCRVLRKGCSENCMLRQSLqcidnPQAQAHATVFVAKFFGRAGLMSFLSSVPQPQRPALFQSLLFEAVGRAVNPVNGAVGLLWSGNWNVCQS 96 
                     6**********************99********************************************************************** PP

          DUF260  91 kaelall 97 
                     +++++l+
  XP_022726351.1  97 AVQTVLR 103
                     9998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSCNGCRVLR KGCSENCMLR QSLQCIDNPQ AQAHATVFVA KFFGRAGLMS FLSSVPQPQR  60
PALFQSLLFE AVGRAVNPVN GAVGLLWSGN WNVCQSAVQT VLRGGTLQPL PEFSCSVSGS  120
DFEDVSETVG DGGQCFRTRD EDFLKRKGFG DVVKYKVTDL DLCLMIGDNR AVKKRREATL  180
SEESETTTVG SRSSADGISS KGGDQKKLLR LFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.12e-64LBD family protein