PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726509.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CAMTA

Protein Properties

Length: 1027aa MW: 115088 Da PI: 6.396

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143	8.7e-45	14	96	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah+een++fqrr+yw+Le++l +iv+vhylevk XP_022726509.1 14 GGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEENENFQRRSYWMLEQDLMHIVFVHYLEVK 96 59******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1027 aa Download sequence
MADRASYSLA PRLGGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDMLH 60 CYYAHGEENE NFQRRSYWML EQDLMHIVFV HYLEVKGSRT IGGIRETSDV SNSQTSSPST 120 SSYSVSHTKA PSGNADSASP TSTLTSLCED ADSEDSHQAS SRFHTSPQIG NAIVMDKTHP 180 GFLNPYSSHA FSGRSSIPGV NGVSHLHGDR LKDTDYGTCM TEAQRTLDLA SWEPGLEPHM 240 PVYATASSHT SMSSTQTDTM SVSMQQENMM KGKQLAVKSA GREFGYPLST KSNLQIPLAD 300 SSLELPGWPT ARSSNFDLPY DSRLFEQKTY DFHLPYALEE FTSHDVLNEQ PVNKNLQMQL 360 INADSNSVMK TYPENDLHSD GNVNYAFCLK KSLLDGEESL KKVDSFSRWI TKELGEVDDL 420 QMQSSSGIAW SSVECGNVSD DASLSPFLSQ DQLFSIVDFS PKWAYIALET EVLIIGICLK 480 SQEEIAKYNW SCMFGEVEVP TKVIADGILS CHAPPHSVGQ VPFYVTCSNR LACSEVREFE 540 YRAGFTTDIN VLDFYGVASR EMLLRLEMLL SLKSFRPPNH HFEGVGEKRH LVTKIISMKE 600 EEECHRIVEL SSDKYLCQHE EKECLLQKLM KEKLYSWLLH KIMEDGKGPN ILDEKGQGVL 660 HLVAALGYDW AIKPTVTAGV SINFRDANGW TALHWAALCG GEETVAILVS LGAAPGLLTD 720 PTPEFPLGRT PADLASGNGH KGISGFLAES SLTSYLSSLT MNDQKEAVQT VSERIATPVN 780 DSDVQDMLSL KDSITAVFNA TQAADRIHQM FRIQSFQWKQ LSESGDGLSD EHAISLVTGK 840 TCRPLQRDGV AHAAATQIQK KFRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTIIWS 900 VGILEKVILR WRRKGSGLRG FRRDAITKEP DPQCMPPKED DYDFLKEGRK QTEERLQKAL 960 TRVKSMAQNP EGRGQYRRLL TLVQGIHENK ACNMVLNSTE EVAVGDEDLL DVDSLLDDDT 1020 FMSFAFE

Sequence ? help Back to Top

Protein Sequence Length: 1027 aa Download sequence

MADRASYSLA PRLGGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDMLH  60
CYYAHGEENE NFQRRSYWML EQDLMHIVFV HYLEVKGSRT IGGIRETSDV SNSQTSSPST  120
SSYSVSHTKA PSGNADSASP TSTLTSLCED ADSEDSHQAS SRFHTSPQIG NAIVMDKTHP  180
GFLNPYSSHA FSGRSSIPGV NGVSHLHGDR LKDTDYGTCM TEAQRTLDLA SWEPGLEPHM  240
PVYATASSHT SMSSTQTDTM SVSMQQENMM KGKQLAVKSA GREFGYPLST KSNLQIPLAD  300
SSLELPGWPT ARSSNFDLPY DSRLFEQKTY DFHLPYALEE FTSHDVLNEQ PVNKNLQMQL  360
INADSNSVMK TYPENDLHSD GNVNYAFCLK KSLLDGEESL KKVDSFSRWI TKELGEVDDL  420
QMQSSSGIAW SSVECGNVSD DASLSPFLSQ DQLFSIVDFS PKWAYIALET EVLIIGICLK  480
SQEEIAKYNW SCMFGEVEVP TKVIADGILS CHAPPHSVGQ VPFYVTCSNR LACSEVREFE  540
YRAGFTTDIN VLDFYGVASR EMLLRLEMLL SLKSFRPPNH HFEGVGEKRH LVTKIISMKE  600
EEECHRIVEL SSDKYLCQHE EKECLLQKLM KEKLYSWLLH KIMEDGKGPN ILDEKGQGVL  660
HLVAALGYDW AIKPTVTAGV SINFRDANGW TALHWAALCG GEETVAILVS LGAAPGLLTD  720
PTPEFPLGRT PADLASGNGH KGISGFLAES SLTSYLSSLT MNDQKEAVQT VSERIATPVN  780
DSDVQDMLSL KDSITAVFNA TQAADRIHQM FRIQSFQWKQ LSESGDGLSD EHAISLVTGK  840
TCRPLQRDGV AHAAATQIQK KFRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTIIWS  900
VGILEKVILR WRRKGSGLRG FRRDAITKEP DPQCMPPKED DYDFLKEGRK QTEERLQKAL  960
TRVKSMAQNP EGRGQYRRLL TLVQGIHENK ACNMVLNSTE EVAVGDEDLL DVDSLLDDDT  1020
FMSFAFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein