PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726510.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CAMTA

Protein Properties

Length: 1021aa MW: 114490 Da PI: 6.4012

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	185.5	5.6e-58	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah+een++fqr XP_022726510.1 20 LEAQHRWLRPAEICEILSNYQKFHIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEENENFQR 114 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Le++l +iv+vhylevk XP_022726510.1 115 RSYWMLEQDLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MADRASYSLA PRLDIEQILL EAQHRWLRPA EICEILSNYQ KFHIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDMLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGSRT IGGIRETSDV SNSQTSSPST SSYSVSHTKA PSGNADSASP 180 TSTLTSLCED ADSEDSHQAS SRFHTSPQIG NAIVMDKTHP GFLNPYSSHA FSGRSSIPGV 240 NGVSHLHGDR LKDTDYGTCM TEAQRTLDLA SWEPGLEPHM PVYATASSHT SMSSTQTDTM 300 SVSMQQENMM KGKQLAVKSA GREFGYPLST KSNLQIPLAD SSLELPGWPT ARSSNFDLPY 360 DSRLFEQKTY DFHLPYALEE FTSHDVLNEQ PVNKNLQMQL INADSNSVMK TYPENDLHSD 420 GNVNYAFCLK KSLLDGEESL KKVDSFSRWI TKELGEVDDL QMQSSSGIAW SSVECGNVSD 480 DASLSPFLSQ DQLFSIVDFS PKWAYIALET EVLIIGICLK SQEEIAKYNW SCMFGEVEVP 540 TKVIADGILS CHAPPHSVGQ VPFYVTCSNR PPNHHFEGVG EKRHLVTKII SMKEEEECHR 600 IVELSSDKYL CQHEEKECLL QKLMKEKLYS WLLHKIMEDG KGPNILDEKG QGVLHLVAAL 660 GYDWAIKPTV TAGVSINFRD ANGWTALHWA ALCGGEETVA ILVSLGAAPG LLTDPTPEFP 720 LGRTPADLAS GNGHKGISGF LAESSLTSYL SSLTMNDQKE AVQTVSERIA TPVNDSDVQD 780 MLSLKDSITA VFNATQAADR IHQMFRIQSF QWKQLSESGD GLSDEHAISL VTGKTCRPLQ 840 RDGVAHAAAT QIQKKFRGWK KRKEFLLIRQ RIVKIQAHVR GHQVRKQYRT IIWSVGILEK 900 VILRWRRKGS GLRGFRRDAI TKEPDPQCMP PKEDDYDFLK EGRKQTEERL QKALTRVKSM 960 AQNPEGRGQY RRLLTLVQGI HENKACNMVL NSTEEVAVGD EDLLDVDSLL DDDTFMSFAF 1020 E

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MADRASYSLA PRLDIEQILL EAQHRWLRPA EICEILSNYQ KFHIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDMLH CYYAHGEENE NFQRRSYWML  120
EQDLMHIVFV HYLEVKGSRT IGGIRETSDV SNSQTSSPST SSYSVSHTKA PSGNADSASP  180
TSTLTSLCED ADSEDSHQAS SRFHTSPQIG NAIVMDKTHP GFLNPYSSHA FSGRSSIPGV  240
NGVSHLHGDR LKDTDYGTCM TEAQRTLDLA SWEPGLEPHM PVYATASSHT SMSSTQTDTM  300
SVSMQQENMM KGKQLAVKSA GREFGYPLST KSNLQIPLAD SSLELPGWPT ARSSNFDLPY  360
DSRLFEQKTY DFHLPYALEE FTSHDVLNEQ PVNKNLQMQL INADSNSVMK TYPENDLHSD  420
GNVNYAFCLK KSLLDGEESL KKVDSFSRWI TKELGEVDDL QMQSSSGIAW SSVECGNVSD  480
DASLSPFLSQ DQLFSIVDFS PKWAYIALET EVLIIGICLK SQEEIAKYNW SCMFGEVEVP  540
TKVIADGILS CHAPPHSVGQ VPFYVTCSNR PPNHHFEGVG EKRHLVTKII SMKEEEECHR  600
IVELSSDKYL CQHEEKECLL QKLMKEKLYS WLLHKIMEDG KGPNILDEKG QGVLHLVAAL  660
GYDWAIKPTV TAGVSINFRD ANGWTALHWA ALCGGEETVA ILVSLGAAPG LLTDPTPEFP  720
LGRTPADLAS GNGHKGISGF LAESSLTSYL SSLTMNDQKE AVQTVSERIA TPVNDSDVQD  780
MLSLKDSITA VFNATQAADR IHQMFRIQSF QWKQLSESGD GLSDEHAISL VTGKTCRPLQ  840
RDGVAHAAAT QIQKKFRGWK KRKEFLLIRQ RIVKIQAHVR GHQVRKQYRT IIWSVGILEK  900
VILRWRRKGS GLRGFRRDAI TKEPDPQCMP PKEDDYDFLK EGRKQTEERL QKALTRVKSM  960
AQNPEGRGQY RRLLTLVQGI HENKACNMVL NSTEEVAVGD EDLLDVDSLL DDDTFMSFAF  1020
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein