PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726545.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24490.9 Da    PI: 9.574
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.63e-271059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +i+n+  rqvtfskRr g++KKA+ELS+LCdae+a+++fs+tgkl+eyss
  XP_022726545.1 10 KIDNTAARQVTFSKRRRGLFKKAQELSTLCDAEIALLVFSTTGKLFEYSS 59
                    79**********************************************96 PP
2K-box56.41.3e-19901721799
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      +  +a L kei +  +e+R+l GedL+ L+l+eL++Le+ Le +l+++ ++K+e ++++i++l++k  el e+n++L++++e
  XP_022726545.1  90 ESSTYAVLSKEIAEKTQELRQLRGEDLQGLDLEELKHLEKLLEGGLSRVTKTKDERFFREISTLKRKGAELMEANQQLKQQME 172
                     566788899999999999**************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MTRKKIPIQK IDNTAARQVT FSKRRRGLFK KAQELSTLCD AEIALLVFST TGKLFEYSST  60
SIGQVIERRN LQSEKVGRLD HIPYPELQLE SSTYAVLSKE IAEKTQELRQ LRGEDLQGLD  120
LEELKHLEKL LEGGLSRVTK TKDERFFREI STLKRKGAEL MEANQQLKQQ MEYFPHEVQA  180
VVAQQGQPSE LTTNIRSSTD SSKGYNSSDI SLRLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-57MIKC_MADS family protein