PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726633.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 498aa MW: 54785.1 Da PI: 6.7286

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.4e-17	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l XP_022726633.1 32 KGPWTTAEDAILMEYVKKHGEGNWNAVQKNSGLMRCGKSCRLRWANHL 79 79******************************************9986 PP
2	Myb_DNA-binding	50.3	5.5e-16	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +++eE++++++++++lG++ W++ a+ ++ gRt++++k++w++ XP_022726633.1 85 KGFFSPEEEKIIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 128 6789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MVLPGLGQTP ISMKSNGAGV GSHRMSTHGF KKGPWTTAED AILMEYVKKH GEGNWNAVQK 60 NSGLMRCGKS CRLRWANHLR PNLKKGFFSP EEEKIIIELH AKLGNKWARM AAQLPGRTDN 120 EIKNYWNTRM KRHQRAGLPI YPHQVRDEVA GLVLQQQQEE QQIQQYEGRK RSSSSSLSSN 180 FLYSSQGKNE HDYISYFSLL DSMISSSARQ NKAIPSFYSN LCTSSSNNGG LVPPLSHSFP 240 FVSSSSNLYN QNITSQLPAP SFHFNSGTFE QTLSFSSLLM GAQTEPIDFV PGLKAELPSS 300 QTPQQPTSTP SPTSLYPSIG SACVVAVSSN TNNYCEPKGS SGLLDALLVE SSSLSRNERQ 360 ECEEFPQVID KGEDVMDSVN VEEEGEDDDN KCAVEKQWDH FSSSQPSKGV KSSDESIERM 420 NSMDEDLLSL LNNFPSSTPL PEWYTKTTRM SNGSSSGGMR DGNMVLYAGQ NVSPAPAATA 480 NLNRALGSCC WKNMPGIC

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MVLPGLGQTP ISMKSNGAGV GSHRMSTHGF KKGPWTTAED AILMEYVKKH GEGNWNAVQK  60
NSGLMRCGKS CRLRWANHLR PNLKKGFFSP EEEKIIIELH AKLGNKWARM AAQLPGRTDN  120
EIKNYWNTRM KRHQRAGLPI YPHQVRDEVA GLVLQQQQEE QQIQQYEGRK RSSSSSLSSN  180
FLYSSQGKNE HDYISYFSLL DSMISSSARQ NKAIPSFYSN LCTSSSNNGG LVPPLSHSFP  240
FVSSSSNLYN QNITSQLPAP SFHFNSGTFE QTLSFSSLLM GAQTEPIDFV PGLKAELPSS  300
QTPQQPTSTP SPTSLYPSIG SACVVAVSSN TNNYCEPKGS SGLLDALLVE SSSLSRNERQ  360
ECEEFPQVID KGEDVMDSVN VEEEGEDDDN KCAVEKQWDH FSSSQPSKGV KSSDESIERM  420
NSMDEDLLSL LNNFPSSTPL PEWYTKTTRM SNGSSSGGMR DGNMVLYAGQ NVSPAPAATA  480
NLNRALGSCC WKNMPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-75	MYB family protein