PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726643.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 327aa    MW: 36719.9 Da    PI: 8.0545
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-16116161147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+++G+ +W++Ia+++  gR++k+c++rw++ 
   XP_022726643.1 116 RGHWRPAEDTKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 161
                      899*****************************.***********996 PP
2Myb_DNA-binding56.46.7e-18168211146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++++eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022726643.1 168 RRAFSEEEEERLMQAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 211
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGMVYPDMGS LSLGPNYGIV GSSVSSSQDT YACKGSEMEN ERASWGFRFM GNCKTLSFEE  60
NHSSDVVEGK GSDCSDGFGD NNRTINLNAD LNEENPSENA VSGKETASGQ SKLCARGHWR  120
PAEDTKLKEL VALYGPQNWN LIAEKLEGRS GKSCRLRWFN QLDPRINRRA FSEEEEERLM  180
QAHRLYGNKW AMIARLFPGR TDNAVKNHWH VIMARKYREQ STAYRRRQLN QSVYRRMEET  240
PKFVCRDAAA KAEPPLYCLN IPNRRFGIIS QSQFGTLNDA DGGVHGGSNV SPHLTNGRQA  300
ISSGEFPYNV FYAQQAPFDF FPGVSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.12e-77MYB family protein