PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726760.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 334aa MW: 37823.7 Da PI: 8.1371

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ +++++G g+W+t +++ g+ R++k+c++rw +yl XP_022726760.1 14 KGPWTPDEDQKLLAYIEEHGFGNWRTLPEKAGLQRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.7e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++ ++++++ lG++ W++Ia++++ +Rt++++k++w+++ XP_022726760.1 67 RGKFSLQEEQTIIQLHAFLGNR-WSAIAAHLP-KRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MARSACFENM GLKKGPWTPD EDQKLLAYIE EHGFGNWRTL PEKAGLQRCG KSCRLRWINY 60 LRPDVKRGKF SLQEEQTIIQ LHAFLGNRWS AIAAHLPKRT DNEIKNYWNT HIKKRFTKMG 120 IDPTTHKPKS NLLSSVGRNP GTLSHMAQWE RARLEAEARF VRESKKLMSK PSPENNYKRG 180 FQDGVLKSSK ASAPSARSQC LDVLKAWQSV AAGMFAISNN NLEPPRSTFF NNSIPIVIGC 240 DESSANELDS AAVISDTCIG GIAQDELMLD DDRSNYQMPK LNERFDNSMS LHDTTYHWTA 300 ATGNILEDFS DISVHDFGYP FEQGISIEQI SNIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	7e-97	MYB family protein