PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726786.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 313aa    MW: 33185.8 Da    PI: 4.7746
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.99e-16223259135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCg ++  Tp++Rrgp g+++LCnaCGl+++ kg+
  XP_022726786.1 223 CTNCGISSksTPMMRRGPAGPRSLCNACGLKWANKGV 259
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MANSNRQPTS MYGSGAMNMQ QKLEEEEEDD VPGGGGGEAG EESLDNPQIG YQESVGVVTV  60
MSNGMEEASH ANIYGQGTDL TAVPGNAGAD QLTLSFQGEV YVFDSVSPDK VQAVLLLLGG  120
YEIPSGIPAL GTVPVTQRGM GDFPGRSIQP QRAASLNRFR EKRKERCFDK KIRYTVRKEV  180
ALRMQRKKGQ FTSSKAISNE AASASSGWNG TPGSGQDEQE TLCTNCGISS KSTPMMRRGP  240
AGPRSLCNAC GLKWANKGVL RDLSKVSTVA IQDPSAKTTE QSDAEANDSE AVTVTTEVVS  300
SSNGDNSAVT AER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-79GATA family protein