PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726827.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 478aa MW: 53371 Da PI: 8.223

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	53	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a +++G g W+ I +++g ++t+ q++s+ qk+ XP_022726827.1 53 REKWTEEEHQKFLEALRLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 97 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEGKTSVNAL KSGICRSNGS PQSETLIQLH ELYTFKHDHT LKVRKPYTIT KQREKWTEEE 60 HQKFLEALRL YGRGWRQIEE HVGTKTAVQI RSHAQKFFSK VVRESNGGFQ CSIKPIEIPP 120 PRPKRKPIRP YPRKSVDSHK GISASSQPET SSSPNHFVTE QDNKSLASVL SAFASDAMGS 180 TDSEQQNGCS SPTSSSTNME SINTSPVEKE IDHVTSNLSA EEEKASLSSA NMLGHSAVEN 240 IFFMKSNVDF KDPMCAKGDA TTVVPFTSIK LFGKIVQVKD SVKPFMCAEN LKSQTSKTGQ 300 EDIGAVSEIL VQALPSTYLD TRLSLGAVID DWSMVPSRAN LSPHMEIHPD KNDHVESTSG 360 ATLPRWAFHP GLPFYYITSF NQTHMDFCFK ERMKEKEILN ERSCTGSNTG TVPRAENREK 420 NSDSVDSQSQ HPCPEGRMIP QKCSKGFVPY KRCLAERDMT SSVVASEERE RQRARVCS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEGKTSVNAL KSGICRSNGS PQSETLIQLH ELYTFKHDHT LKVRKPYTIT KQREKWTEEE  60
HQKFLEALRL YGRGWRQIEE HVGTKTAVQI RSHAQKFFSK VVRESNGGFQ CSIKPIEIPP  120
PRPKRKPIRP YPRKSVDSHK GISASSQPET SSSPNHFVTE QDNKSLASVL SAFASDAMGS  180
TDSEQQNGCS SPTSSSTNME SINTSPVEKE IDHVTSNLSA EEEKASLSSA NMLGHSAVEN  240
IFFMKSNVDF KDPMCAKGDA TTVVPFTSIK LFGKIVQVKD SVKPFMCAEN LKSQTSKTGQ  300
EDIGAVSEIL VQALPSTYLD TRLSLGAVID DWSMVPSRAN LSPHMEIHPD KNDHVESTSG  360
ATLPRWAFHP GLPFYYITSF NQTHMDFCFK ERMKEKEILN ERSCTGSNTG TVPRAENREK  420
NSDSVDSQSQ HPCPEGRMIP QKCSKGFVPY KRCLAERDMT SSVVASEERE RQRARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-36	MYB_related family protein