PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726849.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 500aa    MW: 56486.6 Da    PI: 6.7835
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.82.4e-1111305001374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv++L++cAeav+ +d+  a+alL++l+ +a   g+++qR+a++f+++La rla  +  + +  + p +++++ + e+  al+l +e++P ++f+
  XP_022726849.1 130 LVQQLIACAEAVACRDKIHASALLSELRANALVFGTSFQRVASCFAQGLADRLALvQPLGAVGVVGPVAKARTVTLEKDEALSLVYELCPQIQFG 224
                     689***************************************************9444456666677777777889999999************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                     h++aN+ Ilea+e+e+ vH++D++++ Gl    QW +L+q+L  R+++pp +lRiTgvg      +e+l+++g+ L+++A++l+++ ef+v v++
  XP_022726849.1 225 HFVANESILEAFEEESFVHVVDLGMTLGLprghQWRNLMQSLVHRAGQPPkRLRITGVGT----CRERLQAIGDDLEHYAKSLKLNYEFSV-VES 314
                     **********************99886433333*************777779********....**************************9.7** PP

            GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                     +le+l++e+++++++Eal++n+++qlh  ++es    +   +vL+ + +lsPk+++++eq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ +
  XP_022726849.1 315 NLENLKPEDFKTSNDEALVINSIFQLHCAVKESRGALN---SVLQKLHELSPKLLILIEQDSSHNGPFFLGRFMEALHYYSAIFDSLDTMLPKYD 406
                     *****************************988877766...8***************************************************** PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                       r+k+E++++++ei+n+v+ceg  r+erhe++ +Wr+r+++aGF+++p++  + + ak  l k k  +gy++ e++g+lvlgWk++p++++S+W
  XP_022726849.1 407 TRRAKMEQFYFAEEIKNIVSCEGPGRIERHERVDQWRRRMSRAGFQTAPIK--MIMRAKQWLGKAKvCEGYTIAEDKGCLVLGWKSKPIIAASCW 499
                     *************************************************97..567889999999999*************************** PP

            GRAS 374 r 374
                     +
  XP_022726849.1 500 K 500
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MEPGLQWQPQ LYGDDKSNEG TGLDLNLPGM QIYPFNCPIY RNWPTFYETR NHKRLKLEHP  60
MDESVGSNGN HICSTSNSLT SFRRLQFRDH LRAYTQRYLA IEAMEEAAVV MLGGDGNETN  120
EEEGEEGMKL VQQLIACAEA VACRDKIHAS ALLSELRANA LVFGTSFQRV ASCFAQGLAD  180
RLALVQPLGA VGVVGPVAKA RTVTLEKDEA LSLVYELCPQ IQFGHFVANE SILEAFEEES  240
FVHVVDLGMT LGLPRGHQWR NLMQSLVHRA GQPPKRLRIT GVGTCRERLQ AIGDDLEHYA  300
KSLKLNYEFS VVESNLENLK PEDFKTSNDE ALVINSIFQL HCAVKESRGA LNSVLQKLHE  360
LSPKLLILIE QDSSHNGPFF LGRFMEALHY YSAIFDSLDT MLPKYDTRRA KMEQFYFAEE  420
IKNIVSCEGP GRIERHERVD QWRRRMSRAG FQTAPIKMIM RAKQWLGKAK VCEGYTIAED  480
KGCLVLGWKS KPIIAASCWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17490.15e-75GRAS family protein