PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726914.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 816aa    MW: 92004.7 Da    PI: 7.342
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.8e-24133234199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_022726914.1 133 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSSKKLVAGDAFIFL--RGET 224
                     99*****************************63.4445569************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_022726914.1 225 GELLVGVRRA 234
                     99*****996 PP
2Auxin_resp109.43.9e-36259340182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     a+ha+st+ +F+v+Y+Pr+s++eF+v+++k+++++k+++ +G R+km+fe e+ se+r+sGtv+g +d+dp+rWp+SkWr+L
  XP_022726914.1 259 AWHAFSTGAMFTVYYKPRMSPAEFIVPFHKYMESIKNNYLIGLRLKMRFEDEEDSEQRFSGTVIGYEDVDPIRWPGSKWRCL 340
                     79*******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MDYKDVAMAN KNLIGDGAVD TGDELYRELW HACAGPLVTV PRQGDLVFYF PQGHIEQVEA  60
STNQVSYQQV PAYDLPSKIL CRVVNVLLKA ESDTDEVFAQ VTLLPSPKQD ENSVEKEGEV  120
VPPQPQRARV HSFCKTLTAS DTSTHGGFSV LRRHADECLP PLDMSKQPPT QELVAKDLHG  180
NEWRFRHIFR GQPRRHLLQS GWSLFVSSKK LVAGDAFIFL RGETGELLVG VRRAMRKASN  240
ISSSVISSQS MHIGVLATAW HAFSTGAMFT VYYKPRMSPA EFIVPFHKYM ESIKNNYLIG  300
LRLKMRFEDE EDSEQRFSGT VIGYEDVDPI RWPGSKWRCL MVRWDKTSPF HRPDRVSPWK  360
IETALPSVVD VLPNYRLKRS RANMASSPVD TLVLTREGSS KTAMDSSPEN GFPRTLQRQE  420
SLNQGDTIAE NKYPLRGQNQ AEAGFGKRRL APEERIPQVI HGEKKMNPAP VSWTIQKFNE  480
FGQPSVEQNS SNIDQLKTDI FDKGRIIKLL GCPQPMMHSS PPVNMFGAEE MKIQYQDYFP  540
VRSGALGRYN RKHGSDFQQQ AGKWLLPLLP ITQTGKLPHV DLLNSQPLSS QLKDRVKSKG  600
DGICKLFGIP LVNNTIPVEL SLQHTNSMPK LLRQTIASDN LQDSGCDLMS KQSTCSKFDE  660
IALADDERGK PVHTTEQLPE DVVEKFQGGS ARTCIKVHKQ GIAVGRSVDL TKFSGYDELI  720
VELDRIFEFN GELITPNKKW LVVFTDDEDD MMLVGDDPWH EFCTMVRRIF IYTREEIKRM  780
GTQPFNPKVE ENSLGQDLKT GLPGFHNLMH SASVSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein