PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726944.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 291aa MW: 32495 Da PI: 6.1722

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	114	133	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_022726944.1 114 FSCTVCNKTFNRYNNMQMHM 133 89*****************9 PP
2	zf-C2H2	11.6	0.00084	199	221	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + k+H +++ XP_022726944.1 199 FGCRKCGKPFAVGGDWKTHEKNC 221 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MQSPSFTYNN ISPRESACYE ADDVEDEDSI ILSLGPPGQP QRISKYPLSY PPSINTPNYP 60 NPSSAESGVT VALRIGPPPI KTSSSNSNDT GNSLVEGQYW IPSPKQILVG PTQFSCTVCN 120 KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT KPASSMLRLP CYCCAEGCKS NIEHPRSRPL 180 KDFRTLQTHY KRKHGAKPFG CRKCGKPFAV GGDWKTHEKN CGKLWFCICG SDFKHKRSLK 240 DHVRAFGDGH APHTMGFCEV EEEEDDDDDD DDDDNDNVED NDDGSNGPLF F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-121	C2H2 family protein