PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727151.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 228aa MW: 25229.7 Da PI: 8.7791

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.4e-19	69	123	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L rqV vWFqNrRa+ k XP_022727151.1 69 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLALQLKLRPRQVEVWFQNRRARSK 123 78889************************************************98 PP
2	HD-ZIP_I/II	118.6	3.4e-38	69	157	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++++Lkr++ +l+e+n+rL++eveeLr+ XP_022727151.1 69 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLALQLKLRPRQVEVWFQNRRARSKLKQTEMECAYLKRCFGSLTEQNRRLQREVEELRA 157 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MAVLPTSLEL TISVPRFSSS SSIPSSGDQG ASTVRDLDIN QVPSGGAEDE WITASMEDEE 60 ESCNGAPPRK KLRLTKEQSR LLEESFRQNH TLNPKQKETL ALQLKLRPRQ VEVWFQNRRA 120 RSKLKQTEME CAYLKRCFGS LTEQNRRLQR EVEELRAMKV GPPTVISPHS CERLPASTLI 180 MCPRCECVTN TAHDKGPTKM TAATTTAAPL SSKVGTSTLQ SRPSSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	126	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-72	HD-ZIP family protein