PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727154.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 254aa    MW: 29358.7 Da    PI: 9.2163
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.42.4e-20958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    kri+n   rq+t+skRr+gilKKA EL   Cda+v +++fs+tg+l  y+
  XP_022727154.1  9 KRIDNPCSRQITYSKRREGILKKAIELAMSCDADVGLLMFSPTGRLTSYA 58
                    79*********************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGRKRLLIKR IDNPCSRQIT YSKRREGILK KAIELAMSCD ADVGLLMFSP TGRLTSYANK  60
GRIEDIFLRY INQPDDFKGY VHNEEFLYHN LKQLKYEAEM LDKIGRFEAL ERKLCELNRQ  120
KYEAQERIRY YNPDMTKILT IPQANLHQQF VIGAIQRIEK LKKSFFLQKA KLLEKETSPS  180
KLNDVEMPAV KLKGSDLTTE ESVNSKGKRN QSTDDHKEEA CSLAGPHLSI SYLLTQKKNI  240
EDAEDITSID GHLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.13e-32MIKC_MADS family protein