PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727544.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 537aa    MW: 60150.2 Da    PI: 6.3063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS460.78.7e-1411675371374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L++cA+avs+++l +aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   s++ l+++++++ev+P++kf++
  XP_022727544.1 167 LKQVLVSCAKAVSDNNLLMAQWLMDELRRMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---SADLLSYMHILYEVCPYFKFGY 258
                     5799*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e+rvHiiDf+i qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l+ +g+rL+k+Ae+++vpfef++ +a +  +
  XP_022727544.1 259 MSANGAIAEAMKDEDRVHIIDFQIAQGSQWVTLIQAFAARPGGPPHIRITGIDDSASAyaRGGGLNIVGKRLSKLAEHFKVPFEFHA-AAMSGCE 352
                     ******************************************************988899999************************.899999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L v+pgEalaVn++++lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rf+e+l+yy+a+f+s++++l+re +eri
  XP_022727544.1 353 VQEEHLLVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFCETLNYYTAMFESIDVTLSRERKERI 447
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg er+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+++ +  yr+ee++g+l+lgW++r Lv+++aW+
  XP_022727544.1 448 NVEQHCLARDVVNIIACEGPERVERHELLGKWRSRFRMAGFTPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWMNRDLVAACAWK 537
                     *************************************************************95.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MKASQQPRSS VMASRVYHQV KQEVEPYCFP QFPAIDRSLC NSDTSSGSHF SVKNSSEHYC  60
ALVSSSAYGS YTVYNSSSSA SFSPNRSFMS QQESQSYPSD LHHSPDNTYG SPISGSCITD  120
DVSDLRDKLR ELETVMLGPD SDIIDNTISP EMDSWRLVID AISRGDLKQV LVSCAKAVSD  180
NNLLMAQWLM DELRRMVSVS GEPIQRLGAY MLEGLVARLA SSGSSIYKAL RCKEPASADL  240
LSYMHILYEV CPYFKFGYMS ANGAIAEAMK DEDRVHIIDF QIAQGSQWVT LIQAFAARPG  300
GPPHIRITGI DDSASAYARG GGLNIVGKRL SKLAEHFKVP FEFHAAAMSG CEVQEEHLLV  360
RPGEALAVNF AFMLHHMPDE SVSTENHRDR LLRLVKSLSP KVVTLVEQES NTNTAPFFPR  420
FCETLNYYTA MFESIDVTLS RERKERINVE QHCLARDVVN IIACEGPERV ERHELLGKWR  480
SRFRMAGFTP YPLSSLVNAT IKTLLENYCD KYRLEERDGA LYLGWMNRDL VAACAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein