PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727546.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 484aa MW: 52572.4 Da PI: 7.4351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.4	1.7e-29	103	159	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK vkg+ef rsYY+Ct+++C+vkk++e+s+ d+k+v++ Y g+H+h+ XP_022727546.1 103 EDGYNWRKYGQKLVKGNEFIRSYYKCTHPNCQVKKQLEHSH-DGKMVDTAYFGQHDHP 159 7*************************************9.*************8 PP
2	WRKY	106.1	1.8e-33	277	335	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d k+v+itYeg+H+h+ XP_022727546.1 277 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDAKLVIITYEGRHDHD 335 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MVSSGECVTD RVGTEKLRSP VAGSHALQQN SDSKIRSSQS DQGGGTPLIK SEKDLLPNIV 60 VHPSQSEQGG NVSSMISKKT SLTPSPSPGT EGSSPIVREK ASEDGYNWRK YGQKLVKGNE 120 FIRSYYKCTH PNCQVKKQLE HSHDGKMVDT AYFGQHDHPT PLNLPLAVGF VVSAVEERSD 180 NASPTIVKDK SLDANTQTPC KTEPRDGSLP VAVAANEAVK AAPSKSNMIQ NVADSDDDHL 240 ISKRRKKENG NVDASLVEKP STEPRMVVKT LSEVDIVNDG YRWRKYGQKL VKGNPNPRSY 300 YRCSNPGCPV KKHVERASHD AKLVIITYEG RHDHDLPPTR TVTHNTTGVN VHSAAHNDKS 360 GTKVEESETV CLNSSGAENK SSEQLNGESR TKSELSGTLC VDVVDAAILG PENGSNKQRS 420 GKLDPSKESD AVRHDMIVHS KSSSQSTSNE QVMSGKLETK SEIDAVCIDK MVHITPRSDC 480 NSDE

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MVSSGECVTD RVGTEKLRSP VAGSHALQQN SDSKIRSSQS DQGGGTPLIK SEKDLLPNIV  60
VHPSQSEQGG NVSSMISKKT SLTPSPSPGT EGSSPIVREK ASEDGYNWRK YGQKLVKGNE  120
FIRSYYKCTH PNCQVKKQLE HSHDGKMVDT AYFGQHDHPT PLNLPLAVGF VVSAVEERSD  180
NASPTIVKDK SLDANTQTPC KTEPRDGSLP VAVAANEAVK AAPSKSNMIQ NVADSDDDHL  240
ISKRRKKENG NVDASLVEKP STEPRMVVKT LSEVDIVNDG YRWRKYGQKL VKGNPNPRSY  300
YRCSNPGCPV KKHVERASHD AKLVIITYEG RHDHDLPPTR TVTHNTTGVN VHSAAHNDKS  360
GTKVEESETV CLNSSGAENK SSEQLNGESR TKSELSGTLC VDVVDAAILG PENGSNKQRS  420
GKLDPSKESD AVRHDMIVHS KSSSQSTSNE QVMSGKLETK SEIDAVCIDK MVHITPRSDC  480
NSDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	1e-85	WRKY family protein