PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727576.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 28126 Da PI: 8.5739

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.5	1.3e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s XP_022727576.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	95.1	1.1e-31	80	174	6	100
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +++ ++s+++e+ kLk ++e Lqr+qR+llGedL++L+ keL+qLe+qLe+slk++Rs K++++l+q+++lq+ke++l e+n+ L+ kl+e XP_022727576.1 80 VNKPAKELEQSSYREYLKLKTRYEALQRTQRNLLGEDLGPLDSKELEQLERQLESSLKHVRSIKTQYMLDQLSDLQNKEQMLMEANRVLSIKLDE 174 55566777899******************************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCST 60 SSMLKTLDRY QKCSYGAVEV NKPAKELEQS SYREYLKLKT RYEALQRTQR NLLGEDLGPL 120 DSKELEQLER QLESSLKHVR SIKTQYMLDQ LSDLQNKEQM LMEANRVLSI KLDEISTRNQ 180 FQASWEGGEQ SVTFSNQQAD QSQGLFQPLE CNPTLQIGYN PVASDQMAAT THAQQVNGFI 240 PGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-122	MIKC_MADS family protein