PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727600.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 981aa MW: 108496 Da PI: 6.4247

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.8	1.1e-41	153	230	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh l+efD++krsCrrrLa+hn+rrrk+++ XP_022727600.1 153 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDDGKRSCRRRLAGHNKRRRKTNP 230 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence
MKARFGSETH HFYGMNPADL RAVGKRTLEW DLNDWKWDGD LFIASSINPV SADSMGRQFF 60 PLGSGIPVNS SNSSSSCSGE VNLETEKGKR ESEKKRRVIV LEDDGPNEAS SLTLKLGGQG 120 GEGFPISQRE MRNWEGTSGK KTKLSGGSGN RAVCQVEDCG ADLSNAKDYH RRHKVCEMHS 180 KASKALVGNV MQRFCQQCSR FHVLQEFDDG KRSCRRRLAG HNKRRRKTNP DTVVNGNLIN 240 DEQTSGYLLL SLLRILSNMH SNRSDQTTDQ DVLSHLLRNL TNHTGEQGGK NISRLLLEPQ 300 DSEAVSALFS NGQGPPQPFK QHITGPASEM PQKGVCSHGA RGDELQGDTA GAAKMNNFDL 360 NDIYIDSDDG TDDIERSPAP VNTGTSSLDC PSWVQQDSHQ SSPPQTSGNS DLGSAQSPSS 420 SSGDAQSRTG RIVFKLFGKE PNDFPLVLRA QIFDWLSHSP TDIESYIRPG CIVLTIYLCQ 480 AEAAWDELCS DLSFSLSRLL DCSDDTFWRT GWIYIRVQDH IAFIYNGQVV VDTSLPLGSN 540 HYNKIVSVKP IAVSATERAQ FLVKGINLSQ PTSRLLCAVE GKYLVQEATH ELLDGNDDFM 600 EQDELQCVNF SCSIPTVTGR GFIEIEDHGF SSSFFPFIVA EEDVCSEIRM LESVLEITDT 660 DSDVGRIGKM EAKNQAMDFI HEVGWLLHRS QLKSRLGHLD PNRKPFPLSR FKWLMEFSMD 720 HEWCAVVKKL LNIFLDGIVG SGEHPSLNIA LTEMALLHRA VRKNCRPLVE LLLKFVPEKA 780 SDKLGFENET VAGAVLFRPN VLGPAGLTPL HTAAGKDGSE DVLDALTDDP GKVGIDAWKS 840 ARDSTGSTPE DYARLRGSYS YIHLVQKKIN KRPTSGHVAV DIPSALSDCS TNQKQNNKSA 900 SSFEIDQLEL RSMKRHCKLC DQKLGYSHGT AGRTLVYRPA MLSMLAIAAV CVCVALLFKS 960 CPEVLYVFRP FRWELLEYGT S

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence

MKARFGSETH HFYGMNPADL RAVGKRTLEW DLNDWKWDGD LFIASSINPV SADSMGRQFF  60
PLGSGIPVNS SNSSSSCSGE VNLETEKGKR ESEKKRRVIV LEDDGPNEAS SLTLKLGGQG  120
GEGFPISQRE MRNWEGTSGK KTKLSGGSGN RAVCQVEDCG ADLSNAKDYH RRHKVCEMHS  180
KASKALVGNV MQRFCQQCSR FHVLQEFDDG KRSCRRRLAG HNKRRRKTNP DTVVNGNLIN  240
DEQTSGYLLL SLLRILSNMH SNRSDQTTDQ DVLSHLLRNL TNHTGEQGGK NISRLLLEPQ  300
DSEAVSALFS NGQGPPQPFK QHITGPASEM PQKGVCSHGA RGDELQGDTA GAAKMNNFDL  360
NDIYIDSDDG TDDIERSPAP VNTGTSSLDC PSWVQQDSHQ SSPPQTSGNS DLGSAQSPSS  420
SSGDAQSRTG RIVFKLFGKE PNDFPLVLRA QIFDWLSHSP TDIESYIRPG CIVLTIYLCQ  480
AEAAWDELCS DLSFSLSRLL DCSDDTFWRT GWIYIRVQDH IAFIYNGQVV VDTSLPLGSN  540
HYNKIVSVKP IAVSATERAQ FLVKGINLSQ PTSRLLCAVE GKYLVQEATH ELLDGNDDFM  600
EQDELQCVNF SCSIPTVTGR GFIEIEDHGF SSSFFPFIVA EEDVCSEIRM LESVLEITDT  660
DSDVGRIGKM EAKNQAMDFI HEVGWLLHRS QLKSRLGHLD PNRKPFPLSR FKWLMEFSMD  720
HEWCAVVKKL LNIFLDGIVG SGEHPSLNIA LTEMALLHRA VRKNCRPLVE LLLKFVPEKA  780
SDKLGFENET VAGAVLFRPN VLGPAGLTPL HTAAGKDGSE DVLDALTDDP GKVGIDAWKS  840
ARDSTGSTPE DYARLRGSYS YIHLVQKKIN KRPTSGHVAV DIPSALSDCS TNQKQNNKSA  900
SSFEIDQLEL RSMKRHCKLC DQKLGYSHGT AGRTLVYRPA MLSMLAIAAV CVCVALLFKS  960
CPEVLYVFRP FRWELLEYGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein