PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727689.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 419aa    MW: 46027.4 Da    PI: 5.1823
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.54.2e-116574163374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      lLl+cAe+v+ ++le a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l +++ + ++s++ ++al+ ++ +sP++kfsh+t
  XP_022727689.1  57 GLLLQCAECVAMDNLEDATDLLPEISELSSPFGSSPERVGAYFAHALQARVVSSCLRTYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFT 151
                     58********************************************************************************************* PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     aNqaI +a++ge+r+H+iD+di+qGlQWp L++ LasR+++  s+RiTg+g+    s+e le tg+rLa+fA++lg+pfef++l  k  +  +l+
  XP_022727689.1 152 ANQAIFQALDGEDRIHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGP----SSELLELTGKRLAEFATSLGLPFEFHPLEGKIGNVTDLS 242
                     ****************************************************....99*************************9777777779** PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                     +L+v++ Ea+++++++  h l+d ++s       +L+l+  l+Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l+ +s er++vE+
  XP_022727689.1 243 KLEVRSSEAVVIHWMH--HCLYDITGSDLG----TLRLLTMLKPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGVDSLERHTVEQ 330
                     **************99..777777777777....**********************.789*********************************** PP

            GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +l+g ei+n+va  g +r+ + + +e+W e l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  XP_022727689.1 331 QLFGSEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFQPVSLGGNPAAQASLLLGMFPWKGYTLLEENGCLKLGWKDLSLLTASAWQ 416
                     *****************998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MKSKRVDRDV SAATGEDSFA DDPSNKRPNY SSGDKIAVDE QEETVIEGES TGLRLLGLLL  60
QCAECVAMDN LEDATDLLPE ISELSSPFGS SPERVGAYFA HALQARVVSS CLRTYSPLDT  120
KSLTLTQSQK IFNALQSYNS ISPLVKFSHF TANQAIFQAL DGEDRIHVID LDIMQGLQWP  180
GLFHILASRS KKIRSMRITG FGPSSELLEL TGKRLAEFAT SLGLPFEFHP LEGKIGNVTD  240
LSKLEVRSSE AVVIHWMHHC LYDITGSDLG TLRLLTMLKP KLITIVEQDL SHGGSFLGRF  300
VEALHYYSAL FDALGDGLGV DSLERHTVEQ QLFGSEIRNI VAVGGPKRTG EVKVERWGEE  360
LKRVGFQPVS LGGNPAAQAS LLLGMFPWKG YTLLEENGCL KLGWKDLSLL TASAWQPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein