PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727845.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 210aa    MW: 23792.6 Da    PI: 8.7761
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727845.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.63.3e-192670147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++
   XP_022727845.1 26 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 70
                     89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MYKGLLRCGK SCRLRWINYL RPDLKRGNFT EEEDELIIKL HSLLGNKWSL IAGRLPGRTD  60
NEIKNYWNTH IKRKLINGRI DPQTHRPLTE TANTNSTAKA TVTAIAPTEL DLRNVPRFSK  120
ANFITTPSLD FKYNEFQVKG RTESLEEGNC ASSGLTTEEE QQQQQEKYPS SGQELNLELS  180
IGISSGGKNS TQLSSANYAE FKPHPDNSNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.13e-59MYB family protein