PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727920.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 251aa    MW: 29173.3 Da    PI: 9.9733
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.71.7e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss
  XP_022727920.1 10 RIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSNKGKLFEYSS 59
                    8***********************************************96 PP
2K-box95.58.3e-3276173299
           K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     ++++ + ++++ +++++ e  kL + ie Lqr++R+++Ge+L++Lsl++Lq Leqq+++sl++iR++Kn+l+le+i+elqkkek lq++nk+L +
  XP_022727920.1  76 AERQLVPTDSESQANWSLECPKLWSTIEALQRNLRNFMGEELDPLSLRDLQLLEQQIDNSLRRIRTRKNKLMLESISELQKKEKTLQDQNKMLAE 170
                     56677777888899********************************************************************************9 PP

           K-box  97 kle 99 
                     kl+
  XP_022727920.1 171 KLK 173
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRGRVQLRR IENKISRQVT FSKRRTGLLK KAHEISVLCD ADVALIVFSN KGKLFEYSSD  60
SSMERIIERY EQHSYAERQL VPTDSESQAN WSLECPKLWS TIEALQRNLR NFMGEELDPL  120
SLRDLQLLEQ QIDNSLRRIR TRKNKLMLES ISELQKKEKT LQDQNKMLAE KLKVSEKMQT  180
EHEQRELQNL AQNSSSFMQP PPSPPATILF PSLTIGGNYQ AKERTNKEVE AQSRPSTNTV  240
IPPWMLHHVN R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.12e-75MIKC_MADS family protein