PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727956.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HSF

Protein Properties

Length: 401aa MW: 46495.2 Da PI: 5.0008

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	96.9	2e-30	45	154	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT.........XTTSEEEEESXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks.........kekiweFkhksFk 87 Fl+k++++++d++++ ++sws+ g+sfvv+d+++f+ ++Lp++Fkh+nf+SFvRQLn+Y +++ +e+ s +++ weF+++ F XP_022727956.1 45 FLTKTFDMVDDPNTNYIVSWSRGGSSFVVWDPHSFSINLLPRFFKHNNFSSFVRQLNTYFTSRLLLDESLS-GfsqirfrkiDPDKWEFANEGFL 138 9********************************************************777766666543.246666665449******* PP XXXXXXXXXXXXXXXX CS HSF_DNA-bind 88 kgkkellekikrkkse 103 +g+k+ll++i+r++++ XP_022727956.1 139 RGQKHLLKNIRRRRTT 154 **********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MYPYFPVKEE YPSSSYSQSE EDPSMMMPPP PQPMEGLHDS GPPPFLTKTF DMVDDPNTNY 60 IVSWSRGGSS FVVWDPHSFS INLLPRFFKH NNFSSFVRQL NTYFTSRLLL DESLSGFSQI 120 RFRKIDPDKW EFANEGFLRG QKHLLKNIRR RRTTSQPSPS QQALGPCVEV GRFGLDGEVD 180 RLRRDKQVLM MELMKLRQQQ QNTRSYLQAL EERLQGTEKK QQQMMSFLAR AMKNPAFLQQ 240 LIQQKEQRKE LEEAMSKKRR RPIDKGPTGV DVGESSQGSE GINPVKTEPL EFGDYGYQVT 300 ELEALALEMQ GYGRARREQE EAQDELQNRE SYDKDLDEGF WEELLNERFE GELDVPGTEA 360 GEDEDVNVLA DRLGYLGSSP KIGAITYQDR IPWKISRHWC F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MYPYFPVKEE YPSSSYSQSE EDPSMMMPPP PQPMEGLHDS GPPPFLTKTF DMVDDPNTNY  60
IVSWSRGGSS FVVWDPHSFS INLLPRFFKH NNFSSFVRQL NTYFTSRLLL DESLSGFSQI  120
RFRKIDPDKW EFANEGFLRG QKHLLKNIRR RRTTSQPSPS QQALGPCVEV GRFGLDGEVD  180
RLRRDKQVLM MELMKLRQQQ QNTRSYLQAL EERLQGTEKK QQQMMSFLAR AMKNPAFLQQ  240
LIQQKEQRKE LEEAMSKKRR RPIDKGPTGV DVGESSQGSE GINPVKTEPL EFGDYGYQVT  300
ELEALALEMQ GYGRARREQE EAQDELQNRE SYDKDLDEGF WEELLNERFE GELDVPGTEA  360
GEDEDVNVLA DRLGYLGSSP KIGAITYQDR IPWKISRHWC F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	152	RGQKHLLKNIRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-116	HSF family protein