PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727957.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HSF

Protein Properties

Length: 384aa MW: 44600.1 Da PI: 5.0687

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106	3.1e-33	45	137	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d++++ ++sws+ g+sfvv+d+++f+ ++Lp++Fkh+nf+SFvRQLn+Y F+k++ ++ weF+++ F +g+k+ll++ XP_022727957.1 45 FLTKTFDMVDDPNTNYIVSWSRGGSSFVVWDPHSFSINLLPRFFKHNNFSSFVRQLNTYRFRKIDPDK---------WEFANEGFLRGQKHLLKN 130 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r++++ XP_022727957.1 131 IRRRRTT 137 *9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MYPYFPVKEE YPSSSYSQSE EDPSMMMPPP PQPMEGLHDS GPPPFLTKTF DMVDDPNTNY 60 IVSWSRGGSS FVVWDPHSFS INLLPRFFKH NNFSSFVRQL NTYRFRKIDP DKWEFANEGF 120 LRGQKHLLKN IRRRRTTSQP SPSQQALGPC VEVGRFGLDG EVDRLRRDKQ VLMMELMKLR 180 QQQQNTRSYL QALEERLQGT EKKQQQMMSF LARAMKNPAF LQQLIQQKEQ RKELEEAMSK 240 KRRRPIDKGP TGVDVGESSQ GSEGINPVKT EPLEFGDYGY QVTELEALAL EMQGYGRARR 300 EQEEAQDELQ NRESYDKDLD EGFWEELLNE RFEGELDVPG TEAGEDEDVN VLADRLGYLG 360 SSPKIGAITY QDRIPWKISR HWCF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MYPYFPVKEE YPSSSYSQSE EDPSMMMPPP PQPMEGLHDS GPPPFLTKTF DMVDDPNTNY  60
IVSWSRGGSS FVVWDPHSFS INLLPRFFKH NNFSSFVRQL NTYRFRKIDP DKWEFANEGF  120
LRGQKHLLKN IRRRRTTSQP SPSQQALGPC VEVGRFGLDG EVDRLRRDKQ VLMMELMKLR  180
QQQQNTRSYL QALEERLQGT EKKQQQMMSF LARAMKNPAF LQQLIQQKEQ RKELEEAMSK  240
KRRRPIDKGP TGVDVGESSQ GSEGINPVKT EPLEFGDYGY QVTELEALAL EMQGYGRARR  300
EQEEAQDELQ NRESYDKDLD EGFWEELLNE RFEGELDVPG TEAGEDEDVN VLADRLGYLG  360
SSPKIGAITY QDRIPWKISR HWCF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	135	RGQKHLLKNIRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-120	HSF family protein