PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727986.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 582aa MW: 63336.4 Da PI: 6.1391

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.6e-09	388	435	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq XP_022727986.1 388 SHSLAERVRREKISERMKLLQNLVPGC----NKVTGKALMLDEIINYVQSLQ 435 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MENQFFLNAG IPLAAPPLQF GPSLSYSAPI SAWQSLSSAM EIEATELNSS SPDRSQDCFL 60 ITNWEKSTDY GLQFDSALSS MVSSPAASNS NISNESFMIR ELIGKLGSIG NSGEISPHSQ 120 PLLASYINGN NSTNTSCYST PLNSPPKLNF PMMDSLIKEK LPSLGKSMGL NSSVAEFSAD 180 PGFAERAAKF SCFGSRSFNG RTSQFGLNNN TEIPAYRSNP LTANANLPRI SSSPSLKAMG 240 SQVGAVQGTN KNSPLQDRSE LANSQDESTV CEQNPNVDPG FKASKDSYSR KRKAVPKAKT 300 KETSAPASAN AAKVSEPNEE SNEKRCKSTE SNGNENDFVK AEEEAKGSNR NAGDEKQNQT 360 NNNNNTKPPE PSRDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQNL VPGCNKVTGK 420 ALMLDEIINY VQSLQRQVEF LSMRLASVNT RLDFNVDSLM SKDIFQPKTT LPLPIFPMDS 480 SASAIFGHHP QQNPALHSNI SNGTTTQGSM DPLETGICPN INSHLPSITQ FTETIPQYPT 540 FCEGDLQTIV QMGFGQNPSQ EMALQSETFQ GSNQVSHMKV EL

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MENQFFLNAG IPLAAPPLQF GPSLSYSAPI SAWQSLSSAM EIEATELNSS SPDRSQDCFL  60
ITNWEKSTDY GLQFDSALSS MVSSPAASNS NISNESFMIR ELIGKLGSIG NSGEISPHSQ  120
PLLASYINGN NSTNTSCYST PLNSPPKLNF PMMDSLIKEK LPSLGKSMGL NSSVAEFSAD  180
PGFAERAAKF SCFGSRSFNG RTSQFGLNNN TEIPAYRSNP LTANANLPRI SSSPSLKAMG  240
SQVGAVQGTN KNSPLQDRSE LANSQDESTV CEQNPNVDPG FKASKDSYSR KRKAVPKAKT  300
KETSAPASAN AAKVSEPNEE SNEKRCKSTE SNGNENDFVK AEEEAKGSNR NAGDEKQNQT  360
NNNNNTKPPE PSRDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQNL VPGCNKVTGK  420
ALMLDEIINY VQSLQRQVEF LSMRLASVNT RLDFNVDSLM SKDIFQPKTT LPLPIFPMDS  480
SASAIFGHHP QQNPALHSNI SNGTTTQGSM DPLETGICPN INSHLPSITQ FTETIPQYPT  540
FCEGDLQTIV QMGFGQNPSQ EMALQSETFQ GSNQVSHMKV EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-121	bHLH family protein