PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728027.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 209aa    MW: 23949.3 Da    PI: 9.9946
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.21.6e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqvtf+kRrng+lKKA+ELS+LCdaeva+i+fss+g+lyeys+
  XP_022728027.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSILCDAEVALIVFSSRGRLYEYSN 59
                    79***********************************************95 PP
2K-box82.59.2e-2876165392
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 
                     +s+++ ++e +a+++qqe+akL+++i++Lq+++Rhl+G++L+sL++keL+q+e++Le+++++iRskK+  l ++   l+ k  e+++ ++
  XP_022728027.1  76 SSNTNTVTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLNSLTVKELKQIENRLERGITRIRSKKEIELENESVCLRTKIAEIERLQQ 165
                     4555669**************************************************************************999998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSILCD AEVALIVFSS RGRLYEYSNN  60
NIRSTIERYK KACSDSSNTN TVTEINAQYY QQESAKLRQQ IQMLQNSNRH LMGDSLNSLT  120
VKELKQIENR LERGITRIRS KKEIELENES VCLRTKIAEI ERLQQANIVT GTELNVIQAL  180
ASRNFFSPNV IEGPGTAYSH PDKKILHLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.21e-118MIKC_MADS family protein